(address . guix-patches@gnu.org)
877cxyp1wf.fsf@gmail.com
gnu/packages/image-processing.scm | 72 +++++++++++++++++++++++++++++++
1 file changed, 72 insertions(+)
Toggle diff (89 lines)
diff --git a/gnu/packages/image-processing.scm b/gnu/packages/image-processing.scm
index 70c820e76b..271593b5f9 100644
--- a/gnu/packages/image-processing.scm
+++ b/gnu/packages/image-processing.scm
@@ -99,6 +99,7 @@ (define-module (gnu packages image-processing)
#:use-module (gnu packages tls)
#:use-module (gnu packages version-control)
#:use-module (gnu packages video)
+ #:use-module (gnu packages web)
#:use-module (gnu packages xiph)
#:use-module (gnu packages xml)
#:use-module (gnu packages xorg)
@@ -1776,3 +1777,74 @@ (define-public charls
to have them encoded to JPEG-LS, or JPEG-LS streams, which CharLS will decode
to images.")
(license license:bsd-3)))
+
+(define-public gdcm
+ (package
+ (name "gdcm")
+ (version "3.0.20")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/malaterre/GDCM/")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1w78cmm9q7aavs7svdkl4dgilcqk4yazci9m6x7icrssb7cj991i"))))
+ (build-system cmake-build-system)
+ (outputs '("out" "doc"))
+ (arguments
+ (list #:tests? #f
+ #:phases #~(modify-phases %standard-phases
+ (add-before 'configure 'set-LDFLAGS
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (setenv "LDFLAGS"
+ (string-append "-Wl,-rpath="
+ #$output "/lib"))))
+ (add-before 'build 'patch-gdcm-charls.h
+ (lambda _
+ (substitute* "../source/Utilities/gdcm_charls.h"
+ (("# include <CharLS/charls.h>")
+ "# include <charls/charls.h>")) #t)))
+ #:configure-flags #~(list "-DCMAKE_SKIP_RPATH:BOOL=YES"
+ "-DCMAKE_BUILD_TYPE:STRING=Release"
+ "-DCMAKE_C_FLAGS=-fvisibility=hidden"
+ "-DCMAKE_CXX_FLAGS=-fvisibility=hidden"
+ "-DGDCM_BUILD_SHARED_LIBS:BOOL=ON"
+ "-DGDCM_DOCUMENTATION:BOOL=ON"
+ "-DGDCM_USE_SYSTEM_EXPAT:BOOL=ON"
+ "-DGDCM_USE_SYSTEM_ZLIB:BOOL=ON"
+ "-DGDCM_USE_SYSTEM_CHARLS:BOOL=ON"
+ "-DGDCM_USE_SYSTEM_POPPLER:BOOL=ON"
+ "-DGDCM_USE_SYSTEM_LIBXML2:BOOL=ON"
+ "-DGDCM_USE_SYSTEM_JSON:BOOL=ON"
+ "-DGDCM_USE_SYSTEM_UUID:BOOL=ON"
+ "-DGDCM_USE_SYSTEM_OPENJPEG:BOOL=ON"
+ "-DGDCM_USE_SYSTEM_OPENSSL:BOOL=ON"
+ "-DGDCM_PDF_DOCUMENTATION:BOOL=OFF"
+ "-DGCM_BUILD_TESTING:BOOL=OFF"
+ "-DGDCM_BUILD_APPLICATIONS:BOOL=OFF"
+ "-DGDCM_USE_SYSTEM_PAPYRUS3:BOOL=OFF"
+ "-DGDCM_USE_SYSTEM_SOCKETXX:BOOL=OFF"
+ "-DGDCM_USE_SYSTEM_LJPEG:BOOL=OFF")))
+ (inputs (list openssl
+ expat
+ charls
+ poppler
+ libxml2
+ json-c
+ openjpeg
+ `(,util-linux "lib")
+ zlib))
+ (native-inputs (list git pkg-config doxygen graphviz))
+ (home-page "https://gdcm.sourceforge.net")
+ (synopsis
+ "C++ library dedicated to reading/parsing and writing DICOM medical files")
+ (description
+ "Grassroots DICOM (GDCM) is an implementation of the DICOM standard
+designed to be open source so that researchers may access clinical data
+directly. GDCM includes a file format definition and a network communications
+protocol, both of which should be extended to provide a full set of tools for
+a researcher or small medical imaging vendor to interface with an existing
+medical database.")
+ (license license:bsd-3)))
--
2.38.1