From debbugs-submit-bounces@debbugs.gnu.org Sat Jan 14 04:32:11 2023 Received: (at 60640) by debbugs.gnu.org; 14 Jan 2023 09:32:11 +0000 Received: from localhost ([127.0.0.1]:53386 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pGctW-0005PN-Ru for submit@debbugs.gnu.org; Sat, 14 Jan 2023 04:32:11 -0500 Received: from mail-lf1-f54.google.com ([209.85.167.54]:35640) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pGctV-0005P9-8i for 60640@debbugs.gnu.org; Sat, 14 Jan 2023 04:32:09 -0500 Received: by mail-lf1-f54.google.com with SMTP id b3so36340073lfv.2 for <60640@debbugs.gnu.org>; Sat, 14 Jan 2023 01:32:09 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20210112; h=mime-version:message-id:in-reply-to:date:subject:cc:to:from :user-agent:references:from:to:cc:subject:date:message-id:reply-to; bh=T1File3jIuc1SwM5pHYcalYZARj1wO46h7I5zmBrvNc=; b=nycyshHzRbNK4ubrHa2AlRc+3qfvPZvh8nW1guUuVSyM+ajpeyRTAf+ZBRFYR7HaJ/ ZwjVI+42tPHZrBX9rsROut7L1iEtAKkzkuXvDd3tE+LqtCekf8GSf3B5m0UIpllnW3pQ cVVWPE7HvcW9kcZyJvNRtwpRoNgaDMi0mHDSAZc2aS3VK8hMSDGlhDW+wlgZkro1nUdt nv9raFGYrhyRkR95M8CnciVNofW6LzbaWDgE9wy9t96caePyWgehW4+SpAsZMG3aHVTa 7WC1nWncrc9iduLv4M8VtIcPT7IkAF1qM/NvC3mwmHgUC+nLMc0b6ZnFf6uOndU8brWi NQtw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; h=mime-version:message-id:in-reply-to:date:subject:cc:to:from :user-agent:references:x-gm-message-state:from:to:cc:subject:date :message-id:reply-to; bh=T1File3jIuc1SwM5pHYcalYZARj1wO46h7I5zmBrvNc=; b=Y3vz5EAEgo/E34X5SPUiuBI9OV8DdcwVM0Q+Kjj0lXfOB77x2+pnnOaNYEzyzUzRIK KJYIIC3UFTrYEfaUGmlhCzLy/cYsJ3VdZbWKFJH01wGQylEkMGvZbuYVQuCxGStYIJvK W6ZjMBQW+gaEqfl0UNTtNEC5CgJV5HN5kmfP040o8YA/eosUtaqjcGP14PzpXpNfoKOV YDXYjOTeaP0ZKj295ayTtfIbkq87wlxFq3Z1XZgogjoyX3uFSS9H0r+sf8zBFfURQ5cb k/lAJAOfyvaEhqisxkYsLGEyNuYgAsHpLUi7ccswpULr0WOZfuJkt3bixzz11pwwn1VN nfDg== X-Gm-Message-State: AFqh2kqnAtIxW66kyEmrAcpVd5YyIRChhZ4RE1Rxlq6NhHj9gn82YQ6b HUeHyBzyev2uXyH0ph79CX1Ltn6vbZ0= X-Google-Smtp-Source: AMrXdXtJ0x+l3nUKEEJfc2lDizCnXUZpW8GO6CSsOonBYCz0BWAi3xCMJw2r+V5GAp+0WxRLQi33Wg== X-Received: by 2002:ac2:5479:0:b0:4a4:68b9:66f3 with SMTP id e25-20020ac25479000000b004a468b966f3mr20383087lfn.62.1673688722467; Sat, 14 Jan 2023 01:32:02 -0800 (PST) Received: from barbar ([193.64.204.56]) by smtp.gmail.com with ESMTPSA id q10-20020a0565123a8a00b004d10a494d72sm664343lfu.254.2023.01.14.01.32.01 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sat, 14 Jan 2023 01:32:01 -0800 (PST) References: <877cxyp1wf.fsf@gmail.com> <87y1qdo3qq.fsf@gmail.com> <87wn5rfldh.fsf_-_@gnu.org> <875ydau2vf.fsf@gmail.com> <87wn5q9epc.fsf@gnu.org> User-agent: mu4e 1.8.13; emacs 28.2 From: =?utf-8?Q?Tor-bj=C3=B6rn?= Claesson To: Ludovic =?utf-8?Q?Court=C3=A8s?= Subject: Re: bug#60640: Gnu: Add gdcm Date: Sat, 14 Jan 2023 11:30:29 +0200 In-reply-to: <87wn5q9epc.fsf@gnu.org> Message-ID: <87fscdmpgu.fsf@gmail.com> MIME-Version: 1.0 Content-Type: multipart/mixed; boundary="=-=-=" X-Spam-Score: 3.6 (+++) X-Spam-Report: Spam detection software, running on the system "debbugs.gnu.org", has NOT identified this incoming email as spam. The original message has been attached to this so you can view it or label similar future email. If you have any questions, see the administrator of that system for details. Content preview: Here is the first patch, which updates gdcm to 3.0.20. From f4cd5077a762f25a9fa271329a798f324e4db685 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Tor-bj=C3=B6rn=20Claesson?= Date: Sat, 14 Jan 2023 11:23:58 +0200 Subject: [PATCH] gnu: gdcm: Update to 3.0.20. 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The original message has been attached to this so you can view it or label similar future email. If you have any questions, see the administrator of that system for details. Content preview: Here is the first patch, which updates gdcm to 3.0.20. From f4cd5077a762f25a9fa271329a798f324e4db685 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Tor-bj=C3=B6rn=20Claesson?= Date: Sat, 14 Jan 2023 11:23:58 +0200 Subject: [PATCH] gnu: gdcm: Update to 3.0.20. Content analysis details: (2.6 points, 10.0 required) pts rule name description ---- ---------------------- -------------------------------------------------- -0.0 RCVD_IN_DNSWL_NONE RBL: Sender listed at https://www.dnswl.org/, no trust [209.85.167.54 listed in list.dnswl.org] -0.0 RCVD_IN_MSPIKE_H2 RBL: Average reputation (+2) [209.85.167.54 listed in wl.mailspike.net] 3.6 RCVD_IN_SBL_CSS RBL: Received via a relay in Spamhaus SBL-CSS [193.64.204.56 listed in zen.spamhaus.org] 0.0 FREEMAIL_FROM Sender email is commonly abused enduser mail provider (tclaesson[at]gmail.com) 0.0 SPF_HELO_NONE SPF: HELO does not publish an SPF Record -0.0 SPF_PASS SPF: sender matches SPF record -1.0 MAILING_LIST_MULTI Multiple indicators imply a widely-seen list manager --=-=-= Content-Type: text/plain Here is the first patch, which updates gdcm to 3.0.20. --=-=-= Content-Type: text/x-patch Content-Disposition: attachment; filename=0001-gnu-gdcm-Update-to-3.0.20.patch From f4cd5077a762f25a9fa271329a798f324e4db685 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Tor-bj=C3=B6rn=20Claesson?= Date: Sat, 14 Jan 2023 11:23:58 +0200 Subject: [PATCH] gnu: gdcm: Update to 3.0.20. --- gnu/packages/bioinformatics.scm | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 6dd2e8250c..5b886526ad 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -17842,7 +17842,7 @@ (define-public wfmash (define-public gdcm (package (name "gdcm") - (version "2.8.9") + (version "3.0.20") (source (origin (method git-fetch) (uri (git-reference @@ -17852,7 +17852,7 @@ (define-public gdcm (file-name (git-file-name name version)) (sha256 (base32 - "1j8mjnxcwn2xvzhf25lv4dbawxbgc4im1crh8081li7i4mbwswaj")))) + "1w78cmm9q7aavs7svdkl4dgilcqk4yazci9m6x7icrssb7cj991i")))) (build-system cmake-build-system) (arguments (list @@ -17864,7 +17864,7 @@ (define-public gdcm "|TestSCUValidation" "|TestEcho" "|TestFind'")))) - (home-page "http://gdcm.sourceforge.net/wiki/index.php/Main_Page") + (home-page "https://gdcm.sourceforge.net/wiki/index.php/Main_Page") (synopsis "Grassroots DICOM library") (description "Grassroots DICOM (GDCM) is an implementation of the DICOM standard @@ -17873,7 +17873,7 @@ (define-public gdcm protocol, both of which should be extended to provide a full set of tools for a researcher or small medical imaging vendor to interface with an existing medical database.") - (license license:bsd-2))) + (license license:bsd-3))) (define-public wiggletools (package -- 2.38.1 --=-=-= Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable Documentation is also missing, will add this as well. Cheers, Tor-bj=C3=B6rn --=-=-=--