guix becomes unresponsive while building the 'vigra' package

OpenSubmitted by bo0od.
Details
7 participants
  • bo0od
  • Efraim Flashner
  • Leo Famulari
  • Maxim Cournoyer
  • Tobias Geerinckx-Rice
  • Mark H Weaver
  • raingloom
Owner
unassigned
Severity
normal
B
guix outrageously exhaust itself (freeze) when there is package build failure
(address . bug-guix@gnu.org)
eadb0b91-be87-854e-8bb0-29932a2c20fd@riseup.net
Hi There,
I have used "guix pull" then "guix upgrade" one of the packages couldnt be built but thats not the real issue, The real issue it caused guix to freeze for like not less than 2+ hours and i couldnt do anything with the distro until guix cut out the build/upgradation by itself.
check the uploaded content.
Attachment: guixfreeze.png
user@host ~$ guix pullUpdating channel 'guix' from Git repository at 'https://git.savannah.gnu.org/git/guix.git'...Authenticating channel 'guix', commits 9edb3f6 to f589878 (29 new commits)...Building from this channel: guix https://git.savannah.gnu.org/git/guix.git f589878substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%building /gnu/store/2h67qhmnh3hf0pynzk5jggcrbh8fk11j-module-import.drv... module-import-compiled 1.5MiB 832KiB/s 00:02 [##################] 100.0%building /gnu/store/7jkg24cn9r895j1l0h0mn88bflyrjgrr-compute-guix-derivation.drv...Computing Guix derivation for 'x86_64-linux'... |substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%The following derivations will be built: /gnu/store/7brkz5dgsckl62gfnfahicha84npjvya-profile.drv /gnu/store/6frarcmgbbz7nq7d3w2gldcvrac7zyiy-guix-f5898781e.drv /gnu/store/mfibnjbl9i5jah38ra25qcgyxw5yf2fc-guix-f5898781e-modules.drv /gnu/store/f6idlbw2cf92kmy40wb75vcygaf8gf87-guix-cli-modules.drv /gnu/store/fc1gb6r3qgxfbkkwgdjcf93jldsp8lav-guix-config-modules.drv /gnu/store/gvs4w2659h0x1qbhlj3qffw0wslrbqxw-guix-config-source.drv /gnu/store/3ds96rwh9cjpijnbgrfxh8b67aqyy7rz-config.scm.drv /gnu/store/zczr92kiaqp1h77621m138ppb9qrmp6f-guix-config.drv /gnu/store/gyw7jv5b5hapkiwcighq6izmply8958b-guix-system-modules.drv /gnu/store/nvjmmwi7kws7rk8b2gh646wffy7b1dqp-guix-packages-modules.drv /gnu/store/q5rp30f2bpklkklakifwz0dkicc2jym1-guix-packages-base-modules.drv /gnu/store/wvfr6hw0dn6l5ify5ssnsvliyl5dyqmx-guix-system-tests-modules.drv /gnu/store/vcsbgk83ajgmrlraw56xf33m03zsmdml-guix-daemon.drv /gnu/store/w2rcmp9m66r8cvphn7j2davrrn3w59m0-guix-command.drv /gnu/store/mifn7xx708blya5cf21a69m6kc00q5gd-guix-module-union.drv /gnu/store/1wisfkbd837kn5sign1j258cbkamxwv7-inferior-script.scm.drv /gnu/store/c5ghl8m8m6p4507j6d68vc9ggv59lwzd-profile.drv
20.2 MB will be downloaded guix-cli 1.1MiB/s 00:01 | 1017KiB transferred guix-packages 1.9MiB/s 00:02 | 3.9MiB transferred guix-packages-base 9.6MiB 1.8MiB/s 00:05 [##################] 100.0% guix-system 1.6MiB/s 00:04 | 7.1MiB transferred guix-system-tests 300KiB 655KiB/s 00:00 [##################] 100.0%building /gnu/store/3ds96rwh9cjpijnbgrfxh8b67aqyy7rz-config.scm.drv...building /gnu/store/f6idlbw2cf92kmy40wb75vcygaf8gf87-guix-cli-modules.drv...building /gnu/store/gvs4w2659h0x1qbhlj3qffw0wslrbqxw-guix-config-source.drv...building /gnu/store/q5rp30f2bpklkklakifwz0dkicc2jym1-guix-packages-base-modules.drv...building /gnu/store/zczr92kiaqp1h77621m138ppb9qrmp6f-guix-config.drv...building /gnu/store/nvjmmwi7kws7rk8b2gh646wffy7b1dqp-guix-packages-modules.drv...building /gnu/store/fc1gb6r3qgxfbkkwgdjcf93jldsp8lav-guix-config-modules.drv...building /gnu/store/gyw7jv5b5hapkiwcighq6izmply8958b-guix-system-modules.drv...building /gnu/store/wvfr6hw0dn6l5ify5ssnsvliyl5dyqmx-guix-system-tests-modules.drv...building /gnu/store/mfibnjbl9i5jah38ra25qcgyxw5yf2fc-guix-f5898781e-modules.drv...building /gnu/store/mifn7xx708blya5cf21a69m6kc00q5gd-guix-module-union.drv...building /gnu/store/w2rcmp9m66r8cvphn7j2davrrn3w59m0-guix-command.drv...building /gnu/store/vcsbgk83ajgmrlraw56xf33m03zsmdml-guix-daemon.drv...building /gnu/store/6frarcmgbbz7nq7d3w2gldcvrac7zyiy-guix-f5898781e.drv...building CA certificate bundle...building fonts directory...building directory of Info manuals...building database for manual pages...building profile with 1 package...building /gnu/store/1wisfkbd837kn5sign1j258cbkamxwv7-inferior-script.scm.drv...building package cache...building profile with 1 package...New in this revision: 12 new packages: abook, cl-clip, ecl-clip, emacs-elfeed-protocol, emacs-ghq, emacs-mode-line-idle, emacs-vertico, lagrange, python-plumbum, python-pysctp, python-pytest-httpserver, sbcl-clip 43 packages upgraded: acpica@20210331, edgar@1.34, emacs-ivy-posframe@0.6.0, emacs-posframe@1.0.0, emacs-repl-toggle@0.7.1, ghq@1.1.7, gpodder@3.10.18, irssi@1.2.3, libime@1.0.6, librsync@2.3.2, minetest@5.4.1, python-cython@0.29.22, …
hint: Run `guix pull --news' to read all the news.
user@host ~$ guix upgrade The following packages will be upgraded: libreoffice (dependencies or package changed) onionshare (dependencies or package changed)
substitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0%The following derivations will be built: /gnu/store/bjr3zkp0p7na59xc5y613aqc9kxndcaf-libreoffice-6.4.7.2.drv /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv /gnu/store/kwp6yfi9k0djcmiq1izwcsjvkl5q117j-onionshare-2.3.1.drv /gnu/store/8r7vdcypg0av5yd1rg6xabwyzbn40jg2-python-bidict-0.21.2.drv /gnu/store/aipi6pnpv89fwfcn5y5hj7gr5rvdvsdg-python-identify-1.4.25.drv /gnu/store/mvy035wjmkfl7vvc41r1ncgjmq5fi7zw-python-editdistance-0.3.1-1.3ea84a7.drv /gnu/store/bh6dym4n0sdj09bsjbyyrmc92wks6jg8-python-pre-commit-2.10.0.drv /gnu/store/xy86vq54m0l3d4kkzlcg93k1917b6f97-python-sphinx-autodoc-typehints-1.11.1.drv /gnu/store/j772pksrz8wj4qwbg80k203vzhcfsai8-python-sphobjinv-2.0.1.drv /gnu/store/is4i8jdmnm68c9cxkafxq9h0r323kdaw-python-flask-socketio-5.0.1.drv /gnu/store/zsr7npa3i5yf0b8bfa0b6w1khjc9v018-python-socketio-5.1.0.drv /gnu/store/yi2rl7ijkzp2fq40n863pmdxa8j31xig-onionshare-cli-2.3.1.drv
101 items will be downloadedsubstitute: updating substitutes from 'https://ci.guix.gnu.org'... 100.0% glm-0.9.9.8 141KiB 422KiB/s 00:00 [##################] 100.0% Flask-SocketIO-5.0.1.tar.gz 16KiB 4.8MiB/s 00:00 [# ] 6.4 Flask-SocketIO-5.0.1.tar.gz 16KiB 4.1MiB/s 00:00 [##################] 100.0% bidict-0.21.2.tar.gz 373KiB 523KiB/s 00:01 [##################] 100.0% cppunit-1.15.1 197KiB 505KiB/s 00:00 [##################] 100.0% diffutils-3.7 336KiB 825KiB/s 00:00 [##################] 100.0% doxygen-1.8.17 3.6MiB 765KiB/s 00:05 [##################] 100.0% ed-1.16 56KiB 3.8MiB/s 00:00 [##################] 100.0% findutils-4.7.0 497KiB 910KiB/s 00:01 [##################] 100.0% gfortran-7.5.0-lib 5.3MiB 837KiB/s 00:06 [##################] 100.0% glew-2.1.0 331KiB 819KiB/s 00:00 [##################] 100.0% gperf-3.1 97KiB 750KiB/s 00:00 [##################] 100.0% hdf5-1.10.7 2.7MiB 837KiB/s 00:03 [##################] 100.0% ilmbase-2.5.5 214KiB 712KiB/s 00:00 [##################] 100.0% jsoncpp-1.9.2 85KiB 3.5MiB/s 00:00 [##################] 100.0% lapack-3.9.0 2.6MiB 752KiB/s 00:04 [##################] 100.0% libreoffice-6.4.7.2.tar.xz 221.6MiB 4.0MiB/s 00:00 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 770KiB/s 00:00 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 770KiB/s 00:00 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 770KiB/s 00:01 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 829KiB/s 00:01 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 817KiB/s 00:01 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 810KiB/s 00:02 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 805KiB/s 00:02 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 809KiB/s 00:02 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 825KiB/s 00:02 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 820KiB/s 00:02 [ ] 0 libreoffice-6.4.7.2.tar.xz 221.6MiB 361KiB/s 00:06 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 376KiB/s 00:07 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 391KiB/s 00:07 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 413KiB/s 00:07 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 433KiB/s 00:07 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 453KiB/s 00:08 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 471KiB/s 00:08 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 488KiB/s 00:08 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 512KiB/s 00:08 [ ] 1 libreoffice-6.4.7.2.tar.xz 221.6MiB 534KiB/s 00:09 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 555KiB/s 00:09 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 582KiB/s 00:09 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 601KiB/s 00:09 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 631KiB/s 00:10 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 661KiB/s 00:10 [ ] 2 libreoffice-6.4.7.2.tar.xz 221.6MiB 689KiB/s 00:10 [ ] 3 libreoffice-6.4.7.2.tar.xz 221.6MiB 716KiB/s 00:10 [ ] 3 libreoffice-6.4.7.2.tar.xz 221.6MiB 749KiB/s 00:11 [ ] 3 libreoffice-6.4.7.2.tar.xz 221.6MiB 783KiB/s 00:11 [ ] 3 libreoffice-6.4.7.2.tar.xz 221.6MiB 822KiB/s 00:11 [ ] 4 libreoffice-6.4.7.2.tar.xz 221.6MiB 861KiB/s 00:11 [ ] 4 libreoffice-6.4.7.2.tar.xz 221.6MiB 902KiB/s 00:12 [ ] 4 libreoffice-6.4.7.2.tar.xz 221.6MiB 943KiB/s 00:12 [ ] 4 libreoffice-6.4.7.2.tar.xz 221.6MiB 989KiB/s 00:12 [ ] 5 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.0MiB/s 00:12 [# ] 5 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.1MiB/s 00:13 [# ] 6 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.1MiB/s 00:13 [# ] 6 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.2MiB/s 00:13 [# ] 6 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.2MiB/s 00:13 [# ] 7 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.3MiB/s 00:13 [# ] 7 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.3MiB/s 00:14 [# ] 8 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.3MiB/s 00:14 [# ] 8 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.3MiB/s 00:14 [# ] 8 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.4MiB/s 00:15 [# ] 9 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.4MiB/s 00:15 [# ] 9 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.4MiB/s 00:15 [# ] 9 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.4MiB/s 00:15 [# ] 9 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.4MiB/s 00:16 [# ] 10 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.5MiB/s 00:16 [# ] 10 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.5MiB/s 00:16 [# ] 10 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.5MiB/s 00:16 [## ] 11 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.5MiB/s 00:17 [## ] 11 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.5MiB/s 00:17 [## ] 11 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:17 [## ] 12 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:17 [## ] 12 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:18 [## ] 12 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:18 [## ] 13 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:18 [## ] 13 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:18 [## ] 13 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:19 [## ] 14 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:19 [## ] 14 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:19 [## ] 14 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:19 [## ] 15 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:20 [## ] 15 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:20 [## ] 15 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:20 [## ] 16 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:20 [## ] 16 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:21 [### ] 16 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:21 [### ] 17 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:21 [### ] 17 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:21 [### ] 17 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:22 [### ] 18 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:22 [### ] 18 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:22 [### ] 18 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:22 [### ] 19 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:23 [### ] 19 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:23 [### ] 19 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:23 [### ] 20 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:23 [### ] 20 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:24 [### ] 20 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.9MiB/s 00:24 [### ] 21 libreoffice-6.4.7.2.tar.xz 221.6MiB 2.0MiB/s 00:24 [### ] 21 libreoffice-6.4.7.2.tar.xz 221.6MiB 2.0MiB/s 00:24 [### ] 21 libreoffice-6.4.7.2.tar.xz 221.6MiB 2.0MiB/s 00:24 [### ] 21 libreoffice-6.4.7.2.tar.xz 221.6MiB 2.0MiB/s 00:25 [#### ] 22 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:30 [#### ] 22 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:30 [#### ] 22 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.6MiB/s 00:31 [#### ] 22 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:31 [#### ] 23 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:31 [#### ] 23 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:31 [#### ] 23 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:32 [#### ] 23 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:32 [#### ] 23 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:32 [#### ] 24 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:32 [#### ] 24 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:33 [#### ] 24 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:33 [#### ] 24 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:33 [#### ] 25 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:33 [#### ] 25 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:34 [#### ] 25 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:34 [#### ] 26 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:34 [#### ] 26 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:34 [#### ] 26 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:35 [#### ] 26 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:35 [#### ] 27 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:35 [#### ] 27 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:35 [#### ] 27 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:36 [##### ] 27 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:36 [##### ] 28 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:36 [##### ] 28 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.7MiB/s 00:36 [##### ] 28 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:37 [##### ] 28 libreoffice-6.4.7.2.tar.xz 221.6MiB 1.8MiB/s 00:37 [##### ] 29 libreoffice-6.4.7.2.tar.xz 221.6MiB 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162KiB 198KiB/s 00:01 [##################] 100.0% ziptime-0.0.0-0.2a5bc9d 5KiB 1.8MiB/s 00:00 [##################] 100.0%building /gnu/store/mvy035wjmkfl7vvc41r1ncgjmq5fi7zw-python-editdistance-0.3.1-1.3ea84a7.drv...building /gnu/store/j772pksrz8wj4qwbg80k203vzhcfsai8-python-sphobjinv-2.0.1.drv...building /gnu/store/aipi6pnpv89fwfcn5y5hj7gr5rvdvsdg-python-identify-1.4.25.drv...building /gnu/store/xy86vq54m0l3d4kkzlcg93k1917b6f97-python-sphinx-autodoc-typehints-1.11.1.drv...building /gnu/store/bh6dym4n0sdj09bsjbyyrmc92wks6jg8-python-pre-commit-2.10.0.drv...building /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv... 42% [############################# ]builder for `/gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv' failed with exit code 1build of /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv failedView build log at '/var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2'.cannot build derivation `/gnu/store/bjr3zkp0p7na59xc5y613aqc9kxndcaf-libreoffice-6.4.7.2.drv': 1 dependencies couldn't be builtguix upgrade: error: build of `/gnu/store/bjr3zkp0p7na59xc5y613aqc9kxndcaf-libreoffice-6.4.7.2.drv' faileduser@host ~$
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Leo Famulari wrote on 12 Apr 20:01 +0200
(no subject)
(address . control@debbugs.gnu.org)
YHSLBUZPkLjy1k1W@jasmine.lan
retitle 47717 guix becomes unresponsive while building the 'vigra' package
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Leo Famulari wrote on 12 Apr 20:04 +0200
Re: bug#47717: guix becomes unresponsive while building the 'vigra' package
(name . bo0od)(address . bo0od@riseup.net)(address . 47717@debbugs.gnu.org)
YHSLqEeb6yRril23@jasmine.lan
On Mon, Apr 12, 2021 at 05:39:11AM +0000, bo0od wrote:
Toggle quote (7 lines)> I have used "guix pull" then "guix upgrade" one of the packages couldnt be> built but thats not the real issue, The real issue it caused guix to freeze> for like not less than 2+ hours and i couldnt do anything with the distro> until guix cut out the build/upgradation by itself.> > check the uploaded content.
[...]
Toggle quote (5 lines)> building /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv...> 42% [############################# ]builder for `/gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv' failed with exit code 1> build of /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv failed> View build log at '/var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2'.
So, it failed to build 'vigra'. This package is notoriously expensive tobuild, although it's not expected that your computer would stopresponding.
What kind of computer are you using? Are you using swap?
Ideally, we'd have a substitute for this...
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Tobias Geerinckx-Rice wrote on 12 Apr 20:41 +0200
Re: bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
(name . bo0od)(address . bo0od@riseup.net)
87fszvfirn.fsf@nckx
Hi bo0od,
Your subject was quite dramatic and probably not true. Try to avoid both.
bo0od writes:
Toggle quote (6 lines)> The real issue it caused guix to freeze for like not less than > 2+> hours and i couldnt do anything with the distro until guix cut > out> the build/upgradation by itself.
Take a look at (and next time, attach)
$ bzless /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2
the log file mentioned in the error message. You'll probably find the string ‘Killed’ near the end. If you haven't rebooted yet,
$ grep oom /proc/vmstat
will probably return something non-zero.
If so: you ran out of memory while building a heavy package. This causes your system to become unresponsive whilst it tries to postpone that for as long as possible. This is a fact of Linux.
You can try to work around it by adding RAM, passing ‘-{M,c}1’ to the guix command that failed, and/or enabling swap, but the root cause is you simply don't have enough memory to build this package at its default settings.
Or, you can make sure you download a substitute instead of trying to build everything locally. At the time of writing (commit d14f213) there's a libreoffice substitute on ci.guix.gnu.org. Are substitutes configured and enabled?
Kind regards,
T G-R
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raingloom wrote on 13 Apr 00:59 +0200
(name . Tobias Geerinckx-Rice via Bug reports for GNU Guix)(address . bug-guix@gnu.org)
20210413005934.2613cb57@riseup.net
On Mon, 12 Apr 2021 20:41:00 +0200Tobias Geerinckx-Rice via Bug reports for GNU Guix <bug-guix@gnu.org>wrote:
Toggle quote (42 lines)> Hi bo0od,> > Your subject was quite dramatic and probably not true. Try to > avoid both.> > bo0od writes:> > The real issue it caused guix to freeze for like not less than > > 2+> > hours and i couldnt do anything with the distro until guix cut > > out> > the build/upgradation by itself. > > Take a look at (and next time, attach)> > $ bzless > /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2> > the log file mentioned in the error message. You'll probably find > the string ‘Killed’ near the end. If you haven't rebooted yet,> > $ grep oom /proc/vmstat> > will probably return something non-zero.> > If so: you ran out of memory while building a heavy package. This > causes your system to become unresponsive whilst it tries to > postpone that for as long as possible. This is a fact of Linux.> > You can try to work around it by adding RAM, passing ‘-{M,c}1’ to > the guix command that failed, and/or enabling swap, but the root > cause is you simply don't have enough memory to build this package > at its default settings.> > Or, you can make sure you download a substitute instead of trying > to build everything locally. At the time of writing (commit > d14f213) there's a libreoffice substitute on ci.guix.gnu.org. Are > substitutes configured and enabled?> > Kind regards,> > T G-R
Also this is an issue in general with the Linux OOM killer. I recommendinstalling earlyoom. It's already packaged in Guix and there is even aservice description for it.It will help with the freezing issue.
B
Re: bug#47717: guix becomes unresponsive while building the 'vigra' package
(name . Leo Famulari)(address . leo@famulari.name)(address . 47717@debbugs.gnu.org)
73e4e511-b66a-e62b-7ce8-bb6029ef0d2c@riseup.net
Toggle quote (2 lines)> What kind of computer are you using? Are you using swap?
4GB DDR3 rams, i7 4th generation , 20GB for Guix about 9GB swap
If this is not enough to install simple common used packages like libreoffice or onionshare..etc then this is big issue if guix considered to be targeting average users.
In Qubes distro 4GB is worthless/nothing the minimum is like 8GB and above. If guix is the same thing then no problem but for surely it need to be mentioned somewhere obvious(i didnt find it anywhere saying that).

Toggle quote (23 lines)> On Mon, Apr 12, 2021 at 05:39:11AM +0000, bo0od wrote:>> I have used "guix pull" then "guix upgrade" one of the packages couldnt be>> built but thats not the real issue, The real issue it caused guix to freeze>> for like not less than 2+ hours and i couldnt do anything with the distro>> until guix cut out the build/upgradation by itself.>>>> check the uploaded content.> > [...]> >> building /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv...>> 42% [############################# ]builder for `/gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv' failed with exit code 1>> build of /gnu/store/5a8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv failed>> View build log at '/var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2'.> > So, it failed to build 'vigra'. This package is notoriously expensive to> build, although it's not expected that your computer would stop> responding.> > What kind of computer are you using? Are you using swap?> > Ideally, we'd have a substitute for this...>
B
Re: bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
(name . Tobias Geerinckx-Rice)(address . me@tobias.gr)
0dbc191f-f567-01f0-b20e-67c00fd28937@riseup.net
Toggle quote (1 lines)> Your subject was quite dramatic and probably not true. Try to avoid
both.
yes sound dramatic but i couldnt describe what happened better. about "not true" i posted the error message and i dunno if there is something i can post describing when there is freeze.
> Take a look at (and next time, attach) > > $ bzless > /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2
check the uploaded .txt file
> the log file mentioned in the error message. You'll probably find the > string ‘Killed’ near the end. If you haven't rebooted yet, > > $ grep oom /proc/vmstat
i already rebooted the machine.
> but the root cause is > you simply don't have enough memory to build this package at its default > settings.
4G of ram not enough? That would be interesting if its not.
> there's a libreoffice substitute on ci.guix.gnu.org. Are substitutes > configured and enabled?
No, i dont like workarounds because when i report bugs i try to put myself in the position of new user. If substitutes are essentials for users then it should be enabled by default , or switched automatically if there is something bad happened like this issue. And if its not then the default configurations has something need to be fixed/improved to avoid issues like the one i have reported.


Toggle quote (38 lines)> Hi bo0od,> > Your subject was quite dramatic and probably not true.  Try to avoid both.> > bo0od writes:>> The real issue it caused guix to freeze for like not less than 2+>> hours and i couldnt do anything with the distro until guix cut out>> the build/upgradation by itself.> > Take a look at (and next time, attach)> >  $ bzless >  /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2> > the log file mentioned in the error message.  You'll probably find the > string ‘Killed’ near the end.  If you haven't rebooted yet,> >  $ grep oom /proc/vmstat> > will probably return something non-zero.> > If so: you ran out of memory while building a heavy package.  This > causes your system to become unresponsive whilst it tries to postpone > that for as long as possible.  This is a fact of Linux.> > You can try to work around it by adding RAM, passing ‘-{M,c}1’ to the > guix command that failed, and/or enabling swap, but the root cause is > you simply don't have enough memory to build this package at its default > settings.> > Or, you can make sure you download a substitute instead of trying to > build everything locally.  At the time of writing (commit d14f213) > there's a libreoffice substitute on ci.guix.gnu.org.  Are substitutes > configured and enabled?> > Kind regards,> > T G-R
------> /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2 <------starting phase `set-SOURCE-DATE-EPOCH'phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 secondsstarting phase `set-paths'environment variable `PATH' set to 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variable `SSL_CERT_DIR' unsetenvironment variable `SSL_CERT_FILE' unsetenvironment variable `PYTHONPATH' set to 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variable `BASH_LOADABLES_PATH' unsetenvironment variable `C_INCLUDE_PATH' set to `/gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/include:/gnu/store/85b70gpbs9issc1gbdcvnwb8pip6ihlk-fftw-3.3.8/include:/gnu/store/02z5vgdhgxw4gcjvhx51mvy1ax4lzxmp-fftwf-3.3.8/include:/gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/include:/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include:/gnu/store/vfr3y4j0hqrf2vg8cdb7999604gg6xwc-libjpeg-turbo-2.0.5/include:/gnu/store/3x2kak8abb6z2klch72kfff2qxzv00pj-libpng-1.6.37/include:/gnu/store/d80nhbm9g2y246ajx7q6mpmwh5fssiwq-libtiff-4.1.0/include:/gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include:/gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/include:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/include:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/include:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/include:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/include:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/include:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/include:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/include:/gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include:/gnu/store/gfapkk5c6hvl1d94m4sqnhn7f9l5gqyh-linux-libre-headers-5.4.20/include'environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/include:/gnu/store/85b70gpbs9issc1gbdcvnwb8pip6ihlk-fftw-3.3.8/include:/gnu/store/02z5vgdhgxw4gcjvhx51mvy1ax4lzxmp-fftwf-3.3.8/include:/gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/include:/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include:/gnu/store/vfr3y4j0hqrf2vg8cdb7999604gg6xwc-libjpeg-turbo-2.0.5/include:/gnu/store/3x2kak8abb6z2klch72kfff2qxzv00pj-libpng-1.6.37/include:/gnu/store/d80nhbm9g2y246ajx7q6mpmwh5fssiwq-libtiff-4.1.0/include:/gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include:/gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/include:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/include:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/include:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/include:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/include:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/include:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/include:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/include:/gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include:/gnu/store/gfapkk5c6hvl1d94m4sqnhn7f9l5gqyh-linux-libre-headers-5.4.20/include'environment variable `LIBRARY_PATH' set to 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variable `GUIX_LOCPATH' set to `/gnu/store/hwcky7446s952w0mwchhmm211ll07zrq-glibc-utf8-locales-2.31/lib/locale'phase `set-paths' succeeded after 0.0 secondsstarting phase `install-locale'using 'en_US.utf8' locale for category "LC_ALL"phase `install-locale' succeeded after 0.0 secondsstarting phase 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1/vigranumpy/test/test_multidef.pyvigra-1.11.1/vigranumpy/test/test_rf.pyvigra-1.11.1/vigranumpy/test/test_segmentation.pyvigra-1.11.1/vigranumpy/test/vigranumpytest.cxxphase `unpack' succeeded after 3.1 secondsstarting phase `disable-broken-tests'phase `disable-broken-tests' succeeded after 0.0 secondsstarting phase `patch-usr-bin-file'phase `patch-usr-bin-file' succeeded after 0.0 secondsstarting phase `patch-source-shebangs'patch-shebang: ./config/update-gh-pages.sh.in: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash'patch-shebang: ./config/vigra-config.in: changing `/usr/bin/env python' to `/gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/bin/python'patch-shebang: ./docsrc/makeFunctionIndex.py: changing `/usr/bin/env python' to `/gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/bin/python'patch-shebang: ./docsrc/post.py: changing `/usr/bin/env python' to `/gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/bin/python'phase `patch-source-shebangs' succeeded after 0.4 secondsstarting phase `configure'source directory: "/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1" (relative from build: "../vigra-1.11.1")build directory: "/tmp/guix-build-vigra-1.11.1.drv-0/build"running 'cmake' with arguments ("../vigra-1.11.1" "-DCMAKE_BUILD_TYPE=RelWithDebInfo" "-DCMAKE_INSTALL_PREFIX=/gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1" "-DCMAKE_INSTALL_LIBDIR=lib" "-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=TRUE" "-DCMAKE_INSTALL_RPATH=/gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/lib" "-DCMAKE_VERBOSE_MAKEFILE=ON" "-Wno-dev" "-DVIGRANUMPY_INSTALL_DIR=/gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/lib/python3.8/site-packages" "-DWITH_OPENEXR=1" "-DCMAKE_C_FLAGS=-ffloat-store" "-DCMAKE_CXX_FLAGS=-I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store")-- The C compiler identification is GNU 7.5.0-- The CXX compiler identification is GNU 7.5.0-- Check for working C compiler: /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/gcc-- Check for working C compiler: /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/gcc -- works-- Detecting C compiler ABI info-- Detecting C compiler ABI info - done-- Detecting C compile features-- Detecting C compile features - done-- Check for working CXX compiler: /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++-- Check for working CXX compiler: /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -- works-- Detecting CXX compiler ABI info-- Detecting CXX compiler ABI info - done-- Detecting CXX compile features-- Detecting CXX compile features - done-- Configuring VIGRA version 1.11.1-- Checking template recursion depth: ok-- Searching for ZLIB-- in default locations-- Found ZLIB: /gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/libz.so (found version "1.2.11") -- Searching for TIFF-- in default locations-- Found TIFF: /gnu/store/d80nhbm9g2y246ajx7q6mpmwh5fssiwq-libtiff-4.1.0/lib/libtiff.so (found version "4.1.0") -- Searching for JPEG-- in default locations-- Found JPEG: /gnu/store/vfr3y4j0hqrf2vg8cdb7999604gg6xwc-libjpeg-turbo-2.0.5/lib/libjpeg.so (found version "62") -- Searching for PNG-- in default locations-- Found PNG: /gnu/store/3x2kak8abb6z2klch72kfff2qxzv00pj-libpng-1.6.37/lib/libpng.so (found version "1.6.37") -- Searching for FFTW3-- in default locations-- Found FFTW3: /gnu/store/85b70gpbs9issc1gbdcvnwb8pip6ihlk-fftw-3.3.8/lib/libfftw3.so -- Searching for FFTW3F-- in default locations-- Found FFTW3F: /gnu/store/02z5vgdhgxw4gcjvhx51mvy1ax4lzxmp-fftwf-3.3.8/lib/libfftw3f.so -- Searching for OpenEXR-- in default locations-- Found OpenEXR: /gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/lib/libHalf.so -- Searching for HDF5-- in default locations-- Checking HDF5 version (at least 1.8): ok-- Found HDF5: /gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/lib/libhdf5.so -- Found Doxygen: /gnu/store/l9910ppzvz628ddd84mg7q6axx9khrjc-doxygen-1.8.17/bin/doxygen (found version "1.8.17") found components: doxygen -- Found PythonInterp: /gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/bin/python (found version "3.8.2") -- Searching for Boost (at least version 1.40.0)-- in default locations-- Found Boost: /gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/lib/cmake/Boost-1.72.0/BoostConfig.cmake (found suitable version "1.72.0", minimum required is "1.40.0") -- Checking for threading support: std::thread-- (added compiler flags: -pthread -std=c++11)-- Detected C++ version: 201103-- Checking VIGRANUMPY_DEPENDENCIES-- Using Python 3.8.2 at /gnu/store/bvd09gb8ka642jzgxd2lpqlpdp160gn0-python-wrapper-3.8.2/bin/python-- Found Python includes: /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8-- Found Python library: /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/lib/libpython3.8.so-- Found boost_python library: /gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/lib/libboost_python3.so-- Searching for Python numpy: ok-- Searching for Python nosetests: ok-- Searching for sphinx documentation generator: ok-- Found VIGRANUMPY_DEPENDENCIES: TRUE -- ----------------------------------------------------------- VIGRA configuration information:-- ----------------------------------------------------------- Using ZLIB libraries: /gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/libz.so-- Using PNG libraries: /gnu/store/3x2kak8abb6z2klch72kfff2qxzv00pj-libpng-1.6.37/lib/libpng.so;/gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/libz.so-- Using TIFF libraries: /gnu/store/d80nhbm9g2y246ajx7q6mpmwh5fssiwq-libtiff-4.1.0/lib/libtiff.so-- Using JPEG libraries: /gnu/store/vfr3y4j0hqrf2vg8cdb7999604gg6xwc-libjpeg-turbo-2.0.5/lib/libjpeg.so-- Using OpenEXR libraries: /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/lib/libIlmImf.so;/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/lib/libImath.so;/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/lib/libHalf.so;/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/lib/libIex.so;/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/lib/libIlmThread.so-- Using FFTW libraries: /gnu/store/85b70gpbs9issc1gbdcvnwb8pip6ihlk-fftw-3.3.8/lib/libfftw3.so-- Using HDF5 libraries: /gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/lib/libhdf5.so;/gnu/store/m7jn58prb6dwz33hic8qpdyacr5dmvzd-hdf5-1.10.7/lib/libhdf5_hl.so;/gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/libz.so-- Using Boost Graph Library: /gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/include/boost/graph-- LEMON graph library disabled by user (WITH_LEMON=0)-- Using Python libraries: /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/lib/libpython3.8.so;/gnu/store/kxabg9r2wnb4inc5lvh7r4wxnpj5f8kr-boost-1.72.0/lib/libboost_python3.so-- Using Numpy includes: /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include-- ----------------------------------------------------------- building shared lib-- binaries will be generated in: /tmp/guix-build-vigra-1.11.1.drv-0/build-- manuals will be generated in: /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/doc-- ----------------------------------------------------------- includes will be installed at: /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/include-- libraries will be installed at: /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/lib-- binaries will be installed at: /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/bin-- vigra manuals will be installed at: /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/doc/vigra/index.html-- vigranumpy will be installed at /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/lib/python3.8/site-packages-- vigranumpy manuals will be installed at: /gnu/store/wpfjmw1zng2pbpmba7znafr6zi0ppp6l-vigra-1.11.1/doc/vigranumpy/html/index.html-- ----------------------------------------------------------- Configuring done-- Generating doneCMake Warning: Manually-specified variables were not used by the project:
CMAKE_INSTALL_LIBDIR

-- Build files have been written to: /tmp/guix-build-vigra-1.11.1.drv-0/buildphase `configure' succeeded after 3.9 secondsstarting phase `patch-generated-file-shebangs'phase `patch-generated-file-shebangs' succeeded after 0.1 secondsstarting phase `build'/gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -S/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 -B/tmp/guix-build-vigra-1.11.1.drv-0/build --check-build-system CMakeFiles/Makefile.cmake 0/gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_progress_start /tmp/guix-build-vigra-1.11.1.drv-0/build/CMakeFiles /tmp/guix-build-vigra-1.11.1.drv-0/build/CMakeFiles/progress.marksmake -f CMakeFiles/Makefile2 allmake[1]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'make -f src/impex/CMakeFiles/vigraimpex.dir/build.make src/impex/CMakeFiles/vigraimpex.dir/dependmake -f vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/dependmake[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'cd /tmp/guix-build-vigra-1.11.1.drv-0/build && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/DependInfo.cmake --color=make[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'cd /tmp/guix-build-vigra-1.11.1.drv-0/build && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex /tmp/guix-build-vigra-1.11.1.drv-0/build /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex/CMakeFiles/vigraimpex.dir/DependInfo.cmake --color=Scanning dependencies of target vigraimpexmake[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'make -f src/impex/CMakeFiles/vigraimpex.dir/build.make src/impex/CMakeFiles/vigraimpex.dir/buildmake[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'[ 0%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/bmp.cxx.oScanning dependencies of target vigranumpy_filterscd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/bmp.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/bmp.cxxmake[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'make -f vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/buildmake[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'[ 3%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/kernel.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/kernel.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx[ 3%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/byteorder.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/byteorder.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/byteorder.cxx[ 7%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/codecmanager.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/codecmanager.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/codecmanager.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:43:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:40:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:43:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:40:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/vigranumpykernel.hxx:4:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:45:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/vigranumpykernel.hxx:5:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/kernel.cxx:45:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:796:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~[ 7%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/compression.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/compression.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/compression.cxx[ 11%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/exr.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/exr.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/exr.cxx[ 11%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/gif.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/gif.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/gif.cxx[ 11%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/hdr.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/hdr.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdr.cxx[ 11%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/convolution.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/convolution.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx[ 15%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/hdf5impex.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/hdf5impex.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5impex.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdimage.hxx:42, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/impex.hxx:51, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/hdf5impex.hxx:77, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5impex.cxx:38:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/hdf5impex.hxx:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5impex.cxx:38:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdimage.hxx:42, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/impex.hxx:51, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/hdf5impex.hxx:77, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5impex.cxx:38:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/hdf5impex.hxx:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5impex.cxx:38:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~[ 15%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/hdf5_rf_impex.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/hdf5_rf_impex.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5_rf_impex.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:42:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:40:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:42:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:40:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:43:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/convolution.hxx:41, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:45:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/convolution.hxx:41:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/convolution.cxx:45:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:796:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/matrix.hxx:43, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest.hxx:49, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest_hdf5_impex.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5_rf_impex.cxx:38:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest_hdf5_impex.hxx:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5_rf_impex.cxx:38:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/matrix.hxx:43, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest.hxx:49, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest_hdf5_impex.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5_rf_impex.cxx:38:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/stdexcept:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/config.hxx:41, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/random_forest_hdf5_impex.hxx:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/hdf5_rf_impex.cxx:38:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~[ 15%] Building C object src/impex/CMakeFiles/vigraimpex.dir/iccjpeg.c.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/gcc -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/iccjpeg.c.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/iccjpeg.c[ 19%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/imageinfo.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/imageinfo.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/imageinfo.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_impex.hxx:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/imageinfo.cxx:64:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/locale_classes.h:40, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/ios_base.h:41, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ios:42, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ostream:38, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/iostream:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/imageinfo.cxx:46:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_impex.hxx:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/imageinfo.cxx:64:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/locale_classes.h:40, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/ios_base.h:41, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ios:42, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ostream:38, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/iostream:39, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/imageinfo.cxx:46:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~[ 19%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/jpeg.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/jpeg.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/jpeg.cxx[ 19%] Building C object src/impex/CMakeFiles/vigraimpex.dir/lz4.c.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/gcc -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/lz4.c.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/lz4.c[ 23%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/png.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/png.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/png.cxx[ 23%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/pnm.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/pnm.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/pnm.cxx[ 23%] Building C object src/impex/CMakeFiles/vigraimpex.dir/rgbe.c.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/gcc -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/rgbe.c.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/rgbe.c[ 26%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/sifImport.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/sifImport.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sifImport.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/sifImport.hxx:61, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sifImport.cxx:57:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/locale_classes.h:40, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/ios_base.h:41, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ios:42, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/istream:38, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/fstream:38, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/sifImport.hxx:57, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sifImport.cxx:57:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/sifImport.hxx:61, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sifImport.cxx:57:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/locale_classes.h:40, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/ios_base.h:41, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/ios:42, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/istream:38, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/fstream:38, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/sifImport.hxx:57, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sifImport.cxx:57:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~[ 26%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/sun.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/sun.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/sun.cxx[ 30%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/tiff.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/tiff.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/tiff.cxx[ 30%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/viff.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/viff.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/viff.cxx[ 30%] Building CXX object src/impex/CMakeFiles/vigraimpex.dir/void_vector.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasEXR -DHasHDF5 -DHasJPEG -DHasPNG -DHasTIFF -DHasZLIB -Dvigraimpex_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/bn6bn06b9v72ajd95miqlhmpndvnzpi5-openexr-2.5.5/include/OpenEXR -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigraimpex.dir/void_vector.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/src/impex/void_vector.cxx[ 34%] Linking CXX shared library libvigraimpex.socd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_link_script CMakeFiles/vigraimpex.dir/link.txt --verbose=1/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -fPIC -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -shared -Wl,-soname,libvigraimpex.so.11 -o libvigraimpex.so.11.1.11.1 CMakeFiles/vigraimpex.dir/bmp.cxx.o CMakeFiles/vigraimpex.dir/byteorder.cxx.o CMakeFiles/vigraimpex.dir/codecmanager.cxx.o CMakeFiles/vigraimpex.dir/compression.cxx.o CMakeFiles/vigraimpex.dir/exr.cxx.o CMakeFiles/vigraimpex.dir/gif.cxx.o CMakeFiles/vigraimpex.dir/hdr.cxx.o CMakeFiles/vigraimpex.dir/hdf5impex.cxx.o CMakeFiles/vigraimpex.dir/hdf5_rf_impex.cxx.o CMakeFiles/vigraimpex.dir/iccjpeg.c.o CMakeFiles/vigraimpex.dir/imageinfo.cxx.o CMakeFiles/vigraimpex.dir/jpeg.cxx.o CMakeFiles/vigraimpex.dir/lz4.c.o CMakeFiles/vigraimpex.dir/png.cxx.o CMakeFiles/vigraimpex.dir/pnm.cxx.o CMakeFiles/vigraimpex.dir/rgbe.c.o CMakeFiles/vigraimpex.dir/sifImport.cxx.o CMakeFiles/vigraimpex.dir/sun.cxx.o CMakeFiles/vigraimpex.dir/tiff.cxx.o CMakeFiles/vigraimpex.dir/viff.cxx.o CMakeFiles/vigraimpex.dir/void_vector.cxx.o -Wl,-rpath,:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: -ljpeg -lpng -lz -ltiff -lIlmImf -lImath -lHalf -lIex -lIlmThread -lhdf5 -lhdf5_hl -lz -lz -ltiff -lIlmImf -lImath -lHalf -lIex -lIlmThread -lhdf5 -lhdf5_hl cd /tmp/guix-build-vigra-1.11.1.drv-0/build/src/impex && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_symlink_library libvigraimpex.so.11.1.11.1 libvigraimpex.so.11 libvigraimpex.somake[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'[ 34%] Built target vigraimpexmake -f vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/dependmake[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'cd /tmp/guix-build-vigra-1.11.1.drv-0/build && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/DependInfo.cmake --color=Scanning dependencies of target vigranumpy_samplingmake[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'make -f vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/buildmake[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'[ 34%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_sampling.dir/sampling.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_sampling_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_sampling.dir/sampling.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/resizeimage.hxx:45:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/sampling.cxx:43:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~[ 34%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/filters.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/filters.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/resizeimage.hxx:45:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdimagefunctions.hxx:74, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/nonlineardiffusion.hxx:41, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:41:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/convolution.hxx:41:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/symmetry.hxx:42, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/filters.cxx:42:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:796:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~[ 38%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/tensors.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/tensors.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_convolution.hxx:41:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:41:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/convolution.hxx:41:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/boundarytensor.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/tensors.cxx:42:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:796:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~[ 38%] Linking CXX shared library sampling.socd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_link_script CMakeFiles/vigranumpy_sampling.dir/link.txt --verbose=1/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -fPIC -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -shared -Wl,-soname,sampling.so -o sampling.so CMakeFiles/vigranumpy_sampling.dir/sampling.cxx.o -Wl,-rpath,:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: -lpython3.8 -lboost_python3 Copying target vigranumpy_sampling to temporary module directorycd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E copy_if_different /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/sampling.so /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/vigra/make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'[ 38%] Built target vigranumpy_samplingmake -f vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/dependmake[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'cd /tmp/guix-build-vigra-1.11.1.drv-0/build && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/DependInfo.cmake --color=Scanning dependencies of target vigranumpy_colorsmake[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'make -f vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/buildmake[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'[ 38%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_colors.dir/colors.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_colors_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_colors.dir/colors.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/colors.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/colors.cxx:40:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/colors.cxx:40:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/colors.cxx:40:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/colors.cxx:40:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~[ 38%] Linking CXX shared library colors.socd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_link_script CMakeFiles/vigranumpy_colors.dir/link.txt --verbose=1/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -fPIC -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -shared -Wl,-soname,colors.so -o colors.so CMakeFiles/vigranumpy_colors.dir/colors.cxx.o -Wl,-rpath,:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: -lpython3.8 -lboost_python3 Copying target vigranumpy_colors to temporary module directorycd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E copy_if_different /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/colors.so /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/vigra/make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'[ 38%] Built target vigranumpy_colorsmake -f vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/dependmake[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'cd /tmp/guix-build-vigra-1.11.1.drv-0/build && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1 /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/DependInfo.cmake --color=Scanning dependencies of target vigranumpy_analysismake[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'make -f vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/build.make vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/buildmake[2]: Entering directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'[ 38%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/segmentation.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_analysis_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_analysis.dir/segmentation.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/resizeimage.hxx:45:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdimagefunctions.hxx:74, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/seededregiongrowing.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/watersheds.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:43:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/convolution.hxx:41:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/segmentation.cxx:50:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/stdconvolution.hxx:796:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~[ 38%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/morphology.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/morphology.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/resizeimage.hxx:45:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_resize.hxx:41, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/eccentricitytransform.hxx:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/morphology.cxx:45:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~c++: internal compiler error: Killed (program cc1plus)Please submit a full bug report,with preprocessed source if appropriate.See https://gcc.gnu.org/bugs/ for instructions.make[2]: *** [vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/build.make:66: vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/segmentation.cxx.o] Error 4make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'make[1]: *** [CMakeFiles/Makefile2:4075: vigranumpy/src/core/CMakeFiles/vigranumpy_analysis.dir/all] Error 2make[1]: *** Waiting for unfinished jobs....[ 38%] Building CXX object vigranumpy/src/core/CMakeFiles/vigranumpy_filters.dir/non_local_mean.cxx.ocd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -DHasHDF5 -Dvigranumpy_filters_EXPORTS -I/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include -isystem /gnu/store/gnck8hf5f0wr5w24kxbxan8agrpfz9b1-python-numpy-1.17.3/lib/python3.8/site-packages/numpy/core/include -isystem /gnu/store/rz42ba0my9vrgbkjpkzr2drmnjk5ah50-python-3.8.2/include/python3.8 -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -fPIC -o CMakeFiles/vigranumpy_filters.dir/non_local_mean.cxx.o -c /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxxIn file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:198:31: warning: ‘template<class _Operation> class std::binder1st’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder1st, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:108:11: note: declared here class binder1st ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/initimage.hxx:42:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimageview.hxx:40, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/basicimage.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_array.hxx:45, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:47, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxx:39:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:199:31: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated [-Wdeprecated-declarations] VIGRA_DEFINE_STL_FUNCTOR(std::binder2nd, VigraTrueType, VigraFalseType) ^/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/functortraits.hxx:163:21: note: in definition of macro ‘VIGRA_DEFINE_STL_FUNCTOR’ class FunctorTraits<name<T> > \ ^~~~In file included from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/bits/stl_function.h:1127:0, from /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/string:48, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/numpy_array.hxx:44, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxx:39:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++/backward/binders.h:143:11: note: declared here class binder2nd ^~~~~~~~~In file included from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/multi_convolution.hxx:41:0, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/non_local_mean.hxx:61, from /tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/vigranumpy/src/core/non_local_mean.cxx:41:/tmp/guix-build-vigra-1.11.1.drv-0/vigra-1.11.1/include/vigra/separableconvolution.hxx:1413:13: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(PreconditionViolation) ^~~~~[ 42%] Linking CXX shared library filters.socd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E cmake_link_script CMakeFiles/vigranumpy_filters.dir/link.txt --verbose=1/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++ -fPIC -std=c++11 -pthread -I/gnu/store/b9avhqvimri598xi7d87gkfa9nv9nc57-ilmbase-2.5.5/include/OpenEXR -ffloat-store -O2 -g -DNDEBUG -shared -Wl,-soname,filters.so -o filters.so CMakeFiles/vigranumpy_filters.dir/kernel.cxx.o CMakeFiles/vigranumpy_filters.dir/convolution.cxx.o CMakeFiles/vigranumpy_filters.dir/filters.cxx.o CMakeFiles/vigranumpy_filters.dir/tensors.cxx.o CMakeFiles/vigranumpy_filters.dir/morphology.cxx.o CMakeFiles/vigranumpy_filters.dir/non_local_mean.cxx.o -Wl,-rpath,:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: -lpython3.8 -lboost_python3 Copying target vigranumpy_filters to temporary module directorycd /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core && /gnu/store/3dsl2jalrcyldkrsqab1hc6sv8pyag9z-cmake-minimal-3.16.5/bin/cmake -E copy_if_different /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/src/core/filters.so /tmp/guix-build-vigra-1.11.1.drv-0/build/vigranumpy/vigra/make[2]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'[ 42%] Built target vigranumpy_filtersmake[1]: Leaving directory '/tmp/guix-build-vigra-1.11.1.drv-0/build'make: *** [Makefile:166: all] Error 2command "make" "-j" "2" failed with status 2
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Leo Famulari wrote on 13 Apr 19:35 +0200
Re: bug#47717: guix becomes unresponsive while building the 'vigra' package
(name . bo0od)(address . bo0od@riseup.net)(address . 47717@debbugs.gnu.org)
YHXWfNAWojS67oXE@jasmine.lan
On Tue, Apr 13, 2021 at 11:03:50AM +0000, bo0od wrote:
Toggle quote (10 lines)> 4GB DDR3 rams, i7 4th generation , 20GB for Guix about 9GB swap> > If this is not enough to install simple common used packages like> libreoffice or onionshare..etc then this is big issue if guix considered to> be targeting average users.> > In Qubes distro 4GB is worthless/nothing the minimum is like 8GB and above.> If guix is the same thing then no problem but for surely it need to be> mentioned somewhere obvious(i didnt find it anywhere saying that).
The ideal situation is that substitutes for these packages areavailable, and you don't have to build them.
Using current Guix master branch, I receive a substitute forlibreoffice. Maybe you just need to update, with `guix pull`?
In general, if you want to compile software, there will be some programsthat require a lot of computer to compile. Not even 10 GB RAM will beenough in all cases.
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Tobias Geerinckx-Rice wrote on 14 Apr 02:40 +0200
Re: bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
(name . bo0od)(address . bo0od@riseup.net)
87czuxem1r.fsf@nckx
bo0od writes:
Toggle quote (2 lines)> yes sound dramatic but i couldnt describe what happened better.
I mean the ‘outrageously’ part. When Linux runs out of memory, it freezes up. Moral judgment is futile. Better to adopt raingloom's earlyoom suggestion or similar.
Toggle quote (4 lines)> /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2>> check the uploaded .txt file
I did, hence the question. ;-) The file I asked for is missing.
Toggle quote (2 lines)> 4G of ram not enough? That would be interesting if its not.
Prepare to be interested, I guess... y... yaay...
4 GiB is absolutely not enough to build an outrageous amount of ‘modern’ software, especially in parallel (so not using --cores=1 --max-jobs=1) to make use of those expensive cores.
I'm disgusted too.
Toggle quote (2 lines)> No, i dont like workarounds
Oh, nor do I. My point is this isn't a bug in Guix, so it's not a bug we can ‘fix’. A ‘workaround’ is the best we can do.
For example, one such workaround would be to ask the user whether they want to run the daemon in ‘slow mode’ (--cores=1 --max-jobs=1 etc.) if we detect <N GiB of RAM during installation.
But with only 4 GiB of RAM and -j1 some ‘modern’ things will still fail. At that point you offload or accept substitutes, and I think doing either selectively is pointless.
Toggle quote (4 lines)> If substitutes are essentials for users then it should be > enabled by> default ,
I didn't say they were essential; they're not. They're an alternative to downloading more RAM.
I think the installer now asks whether you want to enable substitutes. Do you remember if it did? If you chose not to, why not, and do you feel like you were making an informed decision?
Toggle quote (4 lines)> or switched automatically if there is something bad happened > like this> issue.
This won't happen. Enabling substitutes requires informed administrator consent. If that's an issue -- and I bet it is! -- we need to do a better job educating them during installation, no later.
Kind regards,
T G-R
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Mark H Weaver wrote on 14 Apr 10:21 +0200
Re: bug#47717: guix becomes unresponsive while building the 'vigra' package
(address . 47717@debbugs.gnu.org)
87im4pqnrg.fsf@netris.org
bo0od <bo0od@riseup.net> writes:
Toggle quote (4 lines)> > What kind of computer are you using? Are you using swap?>> 4GB DDR3 rams, i7 4th generation , 20GB for Guix about 9GB swap
For the record: I don't use binary substitutes at all, and I build myGNOME system plus IceCat locally, using Guix, on a modest Thinkpad X200with 4GB of RAM and 8GB of swap, all while running a GNOME session withEmacs.
I can build _most_ (but not all) packages while running IceCat.However, some builds, e.g. IceCat and WebKitGTK, require too much memoryto build while simultaneously running a modern web browser.
I haven't tried to build Libreoffice recently, but I did so regularly afew years ago.
* * *
I suspect that your problem is that you have too many CPUs relative toyour relatively modest 4GB of RAM. The more CPUs you have, the morecompilers will be run concurrently (by default), and the more RAM youwill need.
In my case, I have only 2 CPUs on my system, so I have only twoinstances of GCC (or whatever compiler) running at any given time.
It might help to pass --cores=2 (or perhaps even --cores=1) toguix-daemon, which should hopefully be honored by the build systems ofmost of our packages, but probably not all (bug reports welcome).
On a Guix system, you can arrange for this in your OS config withsomething like the following (untested):
__ (modify-services %desktop-services____ (guix-service-type config =>_______________________ (guix-configuration_________________________ (inherit config)_________________________ (extra-options '("--cores=2")))))
Mark
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(name . Leo Famulari)(address . leo@famulari.name)(address . 47717@debbugs.gnu.org)
96f44221-6c8d-3902-c8fb-2d4fe70bfb48@riseup.net
Toggle quote (1 lines)> The ideal situation is that substitutes for these packages are
> available, and you don't have to build them.
Does that mean almost every user who gonna use guix system which will eventually fall into the same issue you gonna tell oh sorry default doesnt help do 123? we need solutions for the future, solutions for the coming users not workarounds.
> In general, if you want to compile software, there will be some programs > that require a lot of computer to compile. Not even 10 GB RAM will be > enough in all cases.
Im doing what guix default doing, didnt play with anything and if the default may require more than 10GB of rams this distro wont reach the sunlight for the end, Because even if it reaches he gonna delete it later due to issues similar to this one.
Check this:
https://forums.whonix.org/t/constrained-system-resources-program-starter-wrapper/10914
maybe something like this if guix devs done will solve alot of headaches.
Leo Famulari:
Toggle quote (21 lines)> On Tue, Apr 13, 2021 at 11:03:50AM +0000, bo0od wrote:>> 4GB DDR3 rams, i7 4th generation , 20GB for Guix about 9GB swap>>>> If this is not enough to install simple common used packages like>> libreoffice or onionshare..etc then this is big issue if guix considered to>> be targeting average users.>>>> In Qubes distro 4GB is worthless/nothing the minimum is like 8GB and above.>> If guix is the same thing then no problem but for surely it need to be>> mentioned somewhere obvious(i didnt find it anywhere saying that).> > The ideal situation is that substitutes for these packages are> available, and you don't have to build them.> > Using current Guix master branch, I receive a substitute for> libreoffice. Maybe you just need to update, with `guix pull`?> > In general, if you want to compile software, there will be some programs> that require a lot of computer to compile. Not even 10 GB RAM will be> enough in all cases.>
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Re: bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
(name . Tobias Geerinckx-Rice)(address . me@tobias.gr)
4e1f8d67-2329-6ba1-4e21-9ec978de3cb3@riseup.net
Toggle quote (1 lines)> I mean the ‘outrageously’ part. When Linux runs out of memory, it
> freezes up. Moral judgment is futile. Better to adopt raingloom's > earlyoom suggestion or similar.
Im using default guix system nothing special, If this package usable to solve these stuff i suggest then to include it by default.
I suggest as well to take a look at solutions similar to this one:
https://forums.whonix.org/t/constrained-system-resources-program-starter-wrapper/10914
or even at least possibility of switch virtual console, login as different user and kill the broken processes exhausting system resources.

> I did, hence the question. ;-) The file I asked for is missing.
No, Please check the ticket on the website as i provided the needed log as .txt file but somehow the website(guix issues) fetching it to plain text and seems it didnt reach to you. Here is the link to the ticket:
https://issues.guix.gnu.org/47717
> 4 GiB is absolutely not enough to build an outrageous amount of ‘modern’ > software, especially in parallel (so not using --cores=1 --max-jobs=1) > to make use of those expensive cores. > > I'm disgusted too.
Yes it is, But you know this cant be a way of life with guix for end user no? Something by default should solve this matter otherwise this is not usable distro.
> Oh, nor do I. My point is this isn't a bug in Guix, so it's not a bug > we can ‘fix’. A ‘workaround’ is the best we can do.
So you gonna wait for every user to open xyz tickets and you gonna answer them 1 by 1 the same answer this is not our issue? I dont see this is good idea even if its true its not entirely guix issue but guix need to find out something to close this gap otherwise prepare to see more like this report.
> I think the installer now asks whether you want to enable substitutes. > Do you remember if it did? If you chose not to, why not, and do you > feel like you were making an informed decision?
I used manual installation, didnt see this.
> This won't happen. Enabling substitutes requires informed administrator > consent. If that's an issue -- and I bet it is! -- we need to do a > better job educating them during installation, no later.
Yes if guix can indicate the amount of RAM is low then it can popup a message telling the user due to low RAM and to avoid resources exhausting would you like to activate x to avoid this issue? <- something like this can be done.


Tobias Geerinckx-Rice:
Toggle quote (56 lines)> bo0od writes:>> yes sound dramatic but i couldnt describe what happened better.> > I mean the ‘outrageously’ part.  When Linux runs out of memory, it > freezes up.  Moral judgment is futile.  Better to adopt raingloom's > earlyoom suggestion or similar.> >> /var/log/guix/drvs/5a/8xxi15g20iqr78daw3w1c7xyqmmd1k-vigra-1.11.1.drv.bz2>>>> check the uploaded .txt file> > I did, hence the question. ;-)  The file I asked for is missing.> >> 4G of ram not enough? That would be interesting if its not.> > Prepare to be interested, I guess... y... yaay...> > 4 GiB is absolutely not enough to build an outrageous amount of ‘modern’ > software, especially in parallel (so not using --cores=1 --max-jobs=1) > to make use of those expensive cores.> > I'm disgusted too.> >> No, i dont like workarounds> > Oh, nor do I.  My point is this isn't a bug in Guix, so it's not a bug > we can ‘fix’.  A ‘workaround’ is the best we can do.> > For example, one such workaround would be to ask the user whether they > want to run the daemon in ‘slow mode’ (--cores=1 --max-jobs=1 etc.) if > we detect <N GiB of RAM during installation.> > But with only 4 GiB of RAM and -j1 some ‘modern’ things will still > fail.  At that point you offload or accept substitutes, and I think > doing either selectively is pointless.> >> If substitutes are essentials for users then it should be enabled by>> default ,> > I didn't say they were essential; they're not.  They're an alternative > to downloading more RAM.> > I think the installer now asks whether you want to enable substitutes. > Do you remember if it did?  If you chose not to, why not, and do you > feel like you were making an informed decision?> >> or switched automatically if there is something bad happened like this>> issue.> > This won't happen.  Enabling substitutes requires informed administrator > consent.  If that's an issue -- and I bet it is! -- we need to do a > better job educating them during installation, no later.> > Kind regards,> > T G-R
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Re: bug#47717: guix becomes unresponsive while building the 'vigra' package
(address . 47717@debbugs.gnu.org)
660cd94a-1983-a59d-96d5-dd79794b2460@riseup.net
Toggle quote (1 lines)> It might help to pass --cores=2 (or perhaps even --cores=1) to
> guix-daemon, which should hopefully be honored by the build systems of > most of our packages, but probably not all (bug reports welcome).
Thanks for the suggestion, But you know this is gonna be mouse and cat issue if its not fixed by default for the end user.
- No warning in the docs saying that guix not intended to be for end user with average pc resources (if no body willing to give solution by default).
- No popup telling the user your pc resources/rams (whatever) are low please allow the usage of substitutes for this package in order to avoid possible machine exhausting/freezing <- or any similar message.
...etc from similar ideas.
But leaving it to the air whenever happen it happen and user later discover that guix just refrigerator/freezer tool then wonder why would the user keep using it...
Mark H Weaver:
Toggle quote (43 lines)> bo0od <bo0od@riseup.net> writes:> >> > What kind of computer are you using? Are you using swap?>>>> 4GB DDR3 rams, i7 4th generation , 20GB for Guix about 9GB swap> > For the record: I don't use binary substitutes at all, and I build my> GNOME system plus IceCat locally, using Guix, on a modest Thinkpad X200> with 4GB of RAM and 8GB of swap, all while running a GNOME session with> Emacs.> > I can build _most_ (but not all) packages while running IceCat.> However, some builds, e.g. IceCat and WebKitGTK, require too much memory> to build while simultaneously running a modern web browser.> > I haven't tried to build Libreoffice recently, but I did so regularly a> few years ago.> > * * *> > I suspect that your problem is that you have too many CPUs relative to> your relatively modest 4GB of RAM. The more CPUs you have, the more> compilers will be run concurrently (by default), and the more RAM you> will need.> > In my case, I have only 2 CPUs on my system, so I have only two> instances of GCC (or whatever compiler) running at any given time.> > It might help to pass --cores=2 (or perhaps even --cores=1) to> guix-daemon, which should hopefully be honored by the build systems of> most of our packages, but probably not all (bug reports welcome).> > On a Guix system, you can arrange for this in your OS config with> something like the following (untested):> > __ (modify-services %desktop-services> ____ (guix-service-type config =>> _______________________ (guix-configuration> _________________________ (inherit config)> _________________________ (extra-options '("--cores=2")))))> > Mark>
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Mark H Weaver wrote on 15 Apr 21:56 +0200
Re: bug#47717: guix outrageously exhaust itself (freeze) when there is package build failure
(address . 47717@debbugs.gnu.org)
878s5jiann.fsf@netris.org
bo0od <bo0od@riseup.net> writes:
Toggle quote (7 lines)> > I mean the ‘outrageously’ part. When Linux runs out of memory, it> > freezes up. Moral judgment is futile. Better to adopt raingloom's> > earlyoom suggestion or similar.>> Im using default guix system nothing special, If this package usable to > solve these stuff i suggest then to include it by default.
'earlyoom' behavior is not necessarily desirable. I, for one, have afairly old computer by today's standards, and sometimes I ask it to dointensive things that are at the edge of its capabilities, such ascompiling GNU IceCat. An aggressive 'earlyoom' might prematurely abortjobs that could have completed, and thereby make it impossible for me tocontinue using this old computer for development.
With that in mind, it's far from clear that 'earlyoom' should be ourdefault behavior. It's good to have it as an option, though.
Toggle quote (10 lines)> > 4 GiB is absolutely not enough to build an outrageous amount of ‘modern’> > software, especially in parallel (so not using --cores=1 --max-jobs=1)> > to make use of those expensive cores.> >> > I'm disgusted too.>> Yes it is, But you know this cant be a way of life with guix for end > user no? Something by default should solve this matter otherwise this is > not usable distro.
Many people are happily using it, and are quite enthusiastic about it,so evidently it's "usable". That doesn't imply that it's good foreveryone. Perhaps you would prefer a more traditional distro, or onethat has had more time to mature. If so, that's okay.
Regards, Mark
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(address . 47717@debbugs.gnu.org)
ae83cce7-fcde-c0d9-3a72-052615fb3d25@riseup.net
Toggle quote (1 lines)> Many people are happily using it, and are quite enthusiastic about it,
> so evidently it's "usable". That doesn't imply that it's good for > everyone. Perhaps you would prefer a more traditional distro, or one > that has had more time to mature. If so, that's okay.
I can say that on almost any dying distro like slackware or so. But we need to overcome the issues which are leading to dead projects/distros.
The above issue is one of them if left without solution.
Mark H Weaver:
Toggle quote (37 lines)> bo0od <bo0od@riseup.net> writes:> >> > I mean the ‘outrageously’ part. When Linux runs out of memory, it>> > freezes up. Moral judgment is futile. Better to adopt raingloom's>> > earlyoom suggestion or similar.>>>> Im using default guix system nothing special, If this package usable to>> solve these stuff i suggest then to include it by default.> > 'earlyoom' behavior is not necessarily desirable. I, for one, have a> fairly old computer by today's standards, and sometimes I ask it to do> intensive things that are at the edge of its capabilities, such as> compiling GNU IceCat. An aggressive 'earlyoom' might prematurely abort> jobs that could have completed, and thereby make it impossible for me to> continue using this old computer for development.> > With that in mind, it's far from clear that 'earlyoom' should be our> default behavior. It's good to have it as an option, though.> >> > 4 GiB is absolutely not enough to build an outrageous amount of ‘modern’>> > software, especially in parallel (so not using --cores=1 --max-jobs=1)>> > to make use of those expensive cores.>> >>> > I'm disgusted too.>>>> Yes it is, But you know this cant be a way of life with guix for end>> user no? Something by default should solve this matter otherwise this is>> not usable distro.> > Many people are happily using it, and are quite enthusiastic about it,> so evidently it's "usable". That doesn't imply that it's good for> everyone. Perhaps you would prefer a more traditional distro, or one> that has had more time to mature. If so, that's okay.> > Regards,> Mark>
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Maxim Cournoyer wrote on 21 Apr 03:35 +0200
(name . Mark H Weaver)(address . mhw@netris.org)
871rb4fmhl.fsf@gmail.com
Hi,
Mark H Weaver <mhw@netris.org> writes:
Toggle quote (19 lines)> bo0od <bo0od@riseup.net> writes:>>> > I mean the ‘outrageously’ part. When Linux runs out of memory, it>> > freezes up. Moral judgment is futile. Better to adopt raingloom's>> > earlyoom suggestion or similar.>>>> Im using default guix system nothing special, If this package usable to>> solve these stuff i suggest then to include it by default.>> 'earlyoom' behavior is not necessarily desirable. I, for one, have a> fairly old computer by today's standards, and sometimes I ask it to do> intensive things that are at the edge of its capabilities, such as> compiling GNU IceCat. An aggressive 'earlyoom' might prematurely abort> jobs that could have completed, and thereby make it impossible for me to> continue using this old computer for development.>> With that in mind, it's far from clear that 'earlyoom' should be our> default behavior. It's good to have it as an option, though.
Earlyoom's default config is to only kills processes when both thephysical memory *and* the swap have been used by more than 90%; in suchas serious resource depletion situation, that usually mean having tohard reset the machine, or waiting one night not knowing if it'll bedone doing whatever it's doing the next morning (probably getting OOM'danyway by the kernel, Linux).
Toggle quote (15 lines)>> > 4 GiB is absolutely not enough to build an outrageous amount of ‘modern’>> > software, especially in parallel (so not using --cores=1 --max-jobs=1)>> > to make use of those expensive cores.>> >>> > I'm disgusted too.>>>> Yes it is, But you know this cant be a way of life with guix for end>> user no? Something by default should solve this matter otherwise this is>> not usable distro.>> Many people are happily using it, and are quite enthusiastic about it,> so evidently it's "usable". That doesn't imply that it's good for> everyone. Perhaps you would prefer a more traditional distro, or one> that has had more time to mature. If so, that's okay.
My 2 cents here is that earlyoom makes Guix System more usable on datedhardware than Linux's default OOM behavior; from my experience of usingit on a 4 GiB RAM 2010-era laptop for a good while.
I personally would see it a good option for our users to have it on bydefault *if* we could manage to connect Earlyoom's notification systemwith the desktop (via D-Bus, I think it supports that), so that when aprocess is killed, the users has some feedback about it (the stock LinuxOOMK is sure to not let you wondering what's going on -- everythingstops to a crawl, and your hard drive gets thrashed).
Maxim
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Mark H Weaver wrote on 22 Apr 20:34 +0200
(name . Maxim Cournoyer)(address . maxim.cournoyer@gmail.com)
87k0ouyxpy.fsf@netris.org
Hi Maxim,
Maxim Cournoyer <maxim.cournoyer@gmail.com> writes:
Toggle quote (18 lines)> Mark H Weaver <mhw@netris.org> writes:>>> 'earlyoom' behavior is not necessarily desirable. I, for one, have a>> fairly old computer by today's standards, and sometimes I ask it to do>> intensive things that are at the edge of its capabilities, such as>> compiling GNU IceCat. An aggressive 'earlyoom' might prematurely abort>> jobs that could have completed, and thereby make it impossible for me to>> continue using this old computer for development.>>>> With that in mind, it's far from clear that 'earlyoom' should be our>> default behavior. It's good to have it as an option, though.>> Earlyoom's default config is to only kills processes when both the> physical memory *and* the swap have been used by more than 90%; in such> as serious resource depletion situation, that usually mean having to> hard reset the machine, or waiting one night not knowing if it'll be> done doing whatever it's doing the next morning (probably getting OOM'd> anyway by the kernel, Linux).
[...]
Toggle quote (4 lines)> My 2 cents here is that earlyoom makes Guix System more usable on dated> hardware than Linux's default OOM behavior; from my experience of using> it on a 4 GiB RAM 2010-era laptop for a good while.
Okay, I trust your judgment on this. I haven't tried 'earlyoom' myself.Moreover, my use case is very unusual, and so it doesn't make sense tochoose a default behavior based on my needs.
So, I've changed my mind. Thanks for talking me through it.
Toggle quote (7 lines)> I personally would see it a good option for our users to have it on by> default *if* we could manage to connect Earlyoom's notification system> with the desktop (via D-Bus, I think it supports that), so that when a> process is killed, the users has some feedback about it (the stock Linux> OOMK is sure to not let you wondering what's going on -- everything> stops to a crawl, and your hard drive gets thrashed).
That sounds excellent, if it can be done. Otherwise, it might stillmake sense to have 'earlyoom' on by default in Guix. I'll leave it toothers to decide.
Thanks, Mark
-- Support Richard Stallman against the vicious misinformation campaignagainst him and the FSF. See https://stallmansupport.org for more.
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Efraim Flashner wrote on 25 Apr 10:14 +0200
(name . Mark H Weaver)(address . mhw@netris.org)
YIUkzDS43Ez84hWL@3900XT
On Thu, Apr 22, 2021 at 02:34:22PM -0400, Mark H Weaver wrote:
Toggle quote (47 lines)> Hi Maxim,> > Maxim Cournoyer <maxim.cournoyer@gmail.com> writes:> > > Mark H Weaver <mhw@netris.org> writes:> >> >> 'earlyoom' behavior is not necessarily desirable. I, for one, have a> >> fairly old computer by today's standards, and sometimes I ask it to do> >> intensive things that are at the edge of its capabilities, such as> >> compiling GNU IceCat. An aggressive 'earlyoom' might prematurely abort> >> jobs that could have completed, and thereby make it impossible for me to> >> continue using this old computer for development.> >>> >> With that in mind, it's far from clear that 'earlyoom' should be our> >> default behavior. It's good to have it as an option, though.> >> > Earlyoom's default config is to only kills processes when both the> > physical memory *and* the swap have been used by more than 90%; in such> > as serious resource depletion situation, that usually mean having to> > hard reset the machine, or waiting one night not knowing if it'll be> > done doing whatever it's doing the next morning (probably getting OOM'd> > anyway by the kernel, Linux).> [...]> > My 2 cents here is that earlyoom makes Guix System more usable on dated> > hardware than Linux's default OOM behavior; from my experience of using> > it on a 4 GiB RAM 2010-era laptop for a good while.> > Okay, I trust your judgment on this. I haven't tried 'earlyoom' myself.> Moreover, my use case is very unusual, and so it doesn't make sense to> choose a default behavior based on my needs.> > So, I've changed my mind. Thanks for talking me through it.> > > I personally would see it a good option for our users to have it on by> > default *if* we could manage to connect Earlyoom's notification system> > with the desktop (via D-Bus, I think it supports that), so that when a> > process is killed, the users has some feedback about it (the stock Linux> > OOMK is sure to not let you wondering what's going on -- everything> > stops to a crawl, and your hard drive gets thrashed).> > That sounds excellent, if it can be done. Otherwise, it might still> make sense to have 'earlyoom' on by default in Guix. I'll leave it to> others to decide.> > Thanks,> Mark
FWIW I setup OOM so that it would specifically kill build processes oricecat but not my desktop.
(service earlyoom-service-type (earlyoom-configuration (prefer-regexp "(cc1(plus)?|.rustc-real|ghc|Web Content)") (avoid-regexp "enlightenment")))
-- Efraim Flashner <efraim@flashner.co.il> אפרים פלשנרGPG key = A28B F40C 3E55 1372 662D 14F7 41AA E7DC CA3D 8351Confidentiality cannot be guaranteed on emails sent or received unencrypted
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