Navid Afkhami wrote 4 months ago
(address . guix-patches@gnu.org)(name . Navid Afkhami)(address . navid.afkhami@mdc-berlin.de)
f24860f4f4504812ecf5d44c3ac945a22d06b136.1730313253.git.navid.afkhami@mdc-berlin.de
* gnu/packages/cran.scm (r-fateid): New variable.
Change-Id: If8d8dc20a0d377173a7428ebbfa238695a5d8002
---
gnu/packages/cran.scm | 29 +++++++++++++++++++++++++++++
1 file changed, 29 insertions(+)
Toggle diff (46 lines)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 212f305ba1..aa57134166 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -1038,6 +1038,35 @@ (define-public r-emdist
Distance (EMD).")
(license license:expat)))
+(define-public r-fateid
+ (package
+ (name "r-fateid")
+ (version "0.2.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "FateID" version))
+ (sha256
+ (base32 "0sgvaqhqkmmkcsl53bm1jlfpzrvzfb5cz8k513nizfsi638vydlm"))))
+ (properties `((upstream-name . "FateID")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-locfit
+ r-matrixstats
+ r-pheatmap
+ r-princurve
+ r-randomforest
+ r-rcolorbrewer
+ r-rtsne
+ r-som
+ r-umap))
+ (native-inputs (list r-knitr))
+ (home-page "https://cran.r-project.org/package=FateID")
+ (synopsis "Quantification of fate bias in multipotent progenitors")
+ (description
+ "This package computes cell fate bias for multi-lineage single-cell data.
+It also provides visualization tools for analyzing these biases.")
+ (license license:gpl3)))
+
(define-public r-fuzzyjoin
(package
(name "r-fuzzyjoin")
base-commit: d6f775c30c6f47e174f6110d1089edc6315600e4
prerequisite-patch-id: 54292fa0b75533f02730e2da44993ad685d4a432
prerequisite-patch-id: 360575ef7e49c4e4e6b52644964df061856aee57
--
2.43.0