[PATCH] Removed this package because there is a newer version in carn.scm

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2 participants
  • Navid.Afkhami@mdc-berlin.de
  • nafkhamdc
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nafkhamdc
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nafkhamdc wrote 1 years ago
(address . guix-patches@gnu.org)(name . nafkhamdc)(address . navid.afkhami@mdc-berlin.de)
565d03aa2020fd3a0825eea763d4c6843f44572d.1707130574.git.navid.afkhami@mdc-berlin.de
Change-Id: I3effe7c3118a3ae447243239464cc1fe7f10e637
---
gnu/packages/bioinformatics.scm | 33 ---------------------------------
1 file changed, 33 deletions(-)

Toggle diff (49 lines)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 4db6987763..56709c0332 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -11134,39 +11134,6 @@ (define-public r-projectils
states in the the context of known, reference states.")
(license license:gpl3))))
-(define-public r-presto
- (let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad")
- (revision "0"))
- (package
- (name "r-presto")
- (version (git-version "1.0.0" revision commit))
- (source
- (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/immunogenomics/presto")
- (commit commit)))
- (file-name (git-file-name name version))
- (sha256
- (base32 "1c3fmag4r4p2lvbvxlxyck9dvfw1prbwcl9665mmlx4a35750hk8"))))
- (properties `((upstream . "presto")))
- (build-system r-build-system)
- (propagated-inputs
- (list r-data-table
- r-deseq2
- r-dplyr
- r-matrix
- r-rcpp
- r-rcpparmadillo
- r-reshape2
- r-rlang
- r-tidyr))
- (home-page "https://github.com/immunogenomics/presto")
- (synopsis "Fast Functions for Differential Expression using Wilcox and AUC")
- (description "This package performs a fast Wilcoxon rank sum test and
-auROC analysis.")
- (license license:gpl3))))
-
(define-public r-sccustomize
(let ((commit "397374590dae2ccc0c560897dcd1ce4382c18798")
(revision "1"))

base-commit: 5a806face508cdfcd91e1eb1afb3ec38c002ec92
prerequisite-patch-id: 3a59afadab83198b19921e19197e26925523b4a3
--
2.34.1
Navid.Afkhami@mdc-berlin.de wrote 1 years ago
Closing this bug
(name . 68934-done@debbugs.gnu.org)(address . 68934-done@debbugs.gnu.org)
5eefbd43ffa64344ab41c3ea188d89d2@mdc-berlin.de
This package is actually different than the package in cran.scm . Hence, it should not be removed from bioinformatics.scm


Thanks!


- -

Navid Afkhami

High Performance Computing (HPC)

Max Delbrück Center for Molecular Medicine (MDC)

Robert-Rössle-Straße 10, 13125 Berlin

Phone: +49 30 9406 1316

Email: navid.afkhami@mdc-berlin.de
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Attachment: smime.p7s
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