Mădălin Ionel Patrașcu wrote 1 years ago
(address . guix-patches@gnu.org)
5f8396258ecfaa27e88decd1a899b1afb0fa46d2.1701346805.git.madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioconductor.scm (r-polyester): New variable.
Change-Id: I415089cda3214ec04402fc6f4505fa868414d0e2
---
gnu/packages/bioconductor.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
Toggle diff (43 lines)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7ff364ee55..4f15213481 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9592,6 +9592,34 @@ (define-public r-piano
set analyses.")
(license license:gpl2+)))
+(define-public r-polyester
+ (package
+ (name "r-polyester")
+ (version "1.38.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "polyester" version))
+ (sha256
+ (base32 "1iycdxj0jhh2faclfzflp2cjc2zmxmhy03avv75h0qg3j5kf35l4"))))
+ (properties `((upstream-name . "polyester")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biostrings
+ r-iranges
+ r-limma
+ r-logspline
+ r-s4vectors
+ r-zlibbioc))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/polyester")
+ (synopsis "Simulate RNA-seq reads")
+ (description
+ "The polyester package simulates RNA-seq reads from differential expression
+experiments with replicates. The reads can then be aligned and used to perform
+comparisons of methods for differential expression.")
+ (license license:artistic2.0)))
+
(define-public r-powertcr
(package
(name "r-powertcr")
base-commit: c34c3b1c2b1006ebeede016cca578d5f571fc7a8
--
2.41.0