Mădălin Ionel Patrașcu wrote 1 years ago
(address . guix-patches@gnu.org)
e7942e8a1ff74d8f9b9061b2d5c9ccca47ca3d1e.1699024265.git.madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioconductor.scm (r-rnbeads): New variable.
Change-Id: I78b248a449473fc37ac414295faa6e61269b8625
---
gnu/packages/bioconductor.scm | 36 +++++++++++++++++++++++++++++++++++
1 file changed, 36 insertions(+)
Toggle diff (51 lines)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index d79236ea26..bb51d389cb 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -7976,6 +7976,42 @@ (define-public r-rhtslib
of other R packages who wish to make use of HTSlib.")
(license license:lgpl2.0+)))
+(define-public r-rnbeads
+ (package
+ (name "r-rnbeads")
+ (version "2.20.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "RnBeads" version))
+ (sha256
+ (base32 "15z7l4nmpy01xm19717l27nwf3rfsn6wjv211fn2y4ls40mz75qp"))))
+ (properties `((upstream-name . "RnBeads")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biocgenerics
+ r-cluster
+ r-ff
+ r-fields
+ r-genomicranges
+ r-ggplot2
+ r-gplots
+ r-gridextra
+ r-illuminaio
+ r-iranges
+ r-limma
+ r-mass
+ r-matrixstats
+ r-methylumi
+ r-plyr
+ r-s4vectors))
+ (home-page "https://bioconductor.org/packages/RnBeads")
+ (synopsis "RnBeads")
+ (description
+ "@code{RnBeads} facilitates comprehensive analysis of various types of DNA
+methylation data at the genome scale.")
+ (license license:gpl3)))
+
(define-public r-impute
(package
(name "r-impute")
base-commit: a0a377fdd6c873aeb6340afeddcd23b4ead7657d
--
2.41.0