Navid Afkhami wrote 2 years ago
(address . guix-patches@gnu.org)(name . Navid Afkhami)(address . navid.afkhami@mdc-berlin.de)
7271d3a14849828ed560847be5bb5635fe769a27.1693598614.git.navid.afkhami@mdc-berlin.de
* gnu/packages/bioinformatics.scm (r-chromunity): Update to (git-version 0.0.2 revision commit).
[propagated-inputs]: Add r-bsgenome-hsapiens-ucsc-hg38.
---
gnu/packages/bioinformatics.scm | 38 ++++++++++++++++-----------------
1 file changed, 19 insertions(+), 19 deletions(-)
Toggle diff (65 lines)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 2669942438..f1a0307d3b 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9791,11 +9791,11 @@ (define-public r-skitools
(license license:expat))))
(define-public r-chromunity
- (let ((commit "09fce8bc12cb84b45a6ea25bf8db6e5b75113d4f")
+ (let ((commit "712e56ccba64e8881dbb203546379a5c3c639bb2")
(revision "1"))
(package
(name "r-chromunity")
- (version (git-version "0.0.1" revision commit))
+ (version (git-version "0.0.2" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
@@ -9804,25 +9804,25 @@ (define-public r-chromunity
(file-name (git-file-name name version))
(sha256
(base32
- "0lp0h614k8fq6h9gpbylk4chh7q6w4qda8lx03ajrpppxmg7al2d"))))
+ "0sdja11l7bg5rmcbp2cl226cq9qrj3r8kq5lg49zbin83hya27vh"))))
(properties `((upstream-name . "chromunity")))
(build-system r-build-system)
- (propagated-inputs
- (list r-arrow
- r-biocgenerics
- r-data-table
- r-gchain
- r-genomicranges
- r-gutils
- r-igraph
- r-magrittr
- r-mass
- r-matrix
- r-pbmcapply
- r-plyr
- r-r6
- r-skitools
- r-zoo))
+ (propagated-inputs (list r-arrow
+ r-biocgenerics
+ r-bsgenome-hsapiens-ucsc-hg38
+ r-data-table
+ r-gchain
+ r-genomicranges
+ r-gutils
+ r-igraph
+ r-magrittr
+ r-mass
+ r-matrix
+ r-pbmcapply
+ r-plyr
+ r-r6
+ r-skitools
+ r-zoo))
(home-page "https://github.com/mskilab/chromunity")
(synopsis "Discovery of communities in Pore-C concatemers")
(description "This is a package for the discovery of communities in
base-commit: a88da4199c30291a3155ff1b24b4b5ab3d7c40c0
--
2.34.1