Mădălin Ionel Patrașcu wrote 2 years ago
(address . guix-patches@gnu.org)
20230504142817.25611-1-madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioinformatics.scm (python-screed): Update to 1.1.2.
[native-inputs]: Remove the unnecessary dependencies.
[inputs]: Remove the section.
[build-system]: Change to pyproject.
---
gnu/packages/bioinformatics.scm | 12 +++++-------
1 file changed, 5 insertions(+), 7 deletions(-)
Toggle diff (33 lines)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 181e68b44b..75ea7b35d6 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7628,19 +7628,17 @@ (define-public preseq
(define-public python-screed
(package
(name "python-screed")
- (version "1.0")
+ (version "1.1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "screed" version))
(sha256
- (base32
- "148vcb7w2wr6a4w6vs2bsxanbqibxfk490zbcbg4m61s8669zdjx"))))
- (build-system python-build-system)
+ (base32 "0slva743xn93h4sl5zg2as4ricnnj5pp6nw9dm4qclk4i9xglkvk"))))
+ (build-system pyproject-build-system)
(native-inputs
- (list python-pytest python-pytest-cov python-pytest-runner))
- (inputs
- (list python-bz2file))
+ (list python-pytest-cov
+ python-pytest-runner))
(home-page "https://github.com/dib-lab/screed/")
(synopsis "Short read sequence database utilities")
(description "Screed parses FASTA and FASTQ files and generates databases.
base-commit: fa685c87eaa9888a4278f39bb2b815673589dced
--
2.39.2