(address . guix-patches@gnu.org)
20220628151354.3760-1-madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioconductor.scm (r-basespacer): New variable.
---
gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
1 file changed, 23 insertions(+)
Toggle diff (38 lines)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e87b190c2..51aae2a0f7 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2029,6 +2029,29 @@ (define-public r-aneufinder
sequencing data.")
(license license:artistic2.0)))
+(define-public r-basespacer
+ (package
+ (name "r-basespacer")
+ (version "1.40.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "BaseSpaceR" version))
+ (sha256
+ (base32
+ "0jyw4pnybsd6ywpaamk5ywkrcib2z48farsnszmwq97zlbmra7fj"))))
+ (properties `((upstream-name . "BaseSpaceR")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-rcurl r-rjsonio))
+ (home-page "https://bioconductor.org/packages/BaseSpaceR")
+ (synopsis "R SDK for BaseSpace RESTful API")
+ (description
+ "This package provides a @code{R} interface to Illumina's BaseSpace cloud
+computing environment, enabling the fast development of data analysis and
+visualisation tools. Besides providing an easy to use set of tools for
+manipulating the data from BaseSpace, it also facilitates the access to R's
+rich environment of statistical and data analysis open source tools.")
+ (license license:asl2.0)))
+
(define-public r-biocversion
(package
(name "r-biocversion")
base-commit: 144a750f8b10e606751bc887bcb09e7fb7ae09ff
--
2.36.1