[PATCH] gnu: Add r-asgsca.

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2 participants
  • M?d?lin Ionel Patra?cu
  • Ricardo Wurmus
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M?d?lin Ionel Patra?cu
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M
M
M?d?lin Ionel Patra?cu wrote on 22 Jun 2022 16:07
(address . guix-patches@gnu.org)
20220622140705.17936-1-madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioconductor.scm (r-asgsca): New variable.
---
gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)

Toggle diff (39 lines)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e87b190c2..fba3004e8d 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2029,6 +2029,30 @@ (define-public r-aneufinder
sequencing data.")
(license license:artistic2.0)))
+(define-public r-asgsca
+ (package
+ (name "r-asgsca")
+ (version "1.30.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ASGSCA" version))
+ (sha256
+ (base32
+ "0mxrrkm2lg7gxjh8ynn6qmryn8wqda7b83sr51dpgblay83jcbaq"))))
+ (properties `((upstream-name . "ASGSCA")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-mass r-matrix))
+ (home-page "https://bioconductor.org/packages/ASGSCA")
+ (synopsis
+ "Analysis of the associations between multiple genotypes and multiple traits")
+ (description
+ "The package @dfn{ASGSCA} (Association Study using Generalized Structured
+Component Analysis) provides tools to model and test the association between
+multiple genotypes and multiple traits, taking into account the prior biological
+knowledge. Genes, and clinical pathways are incorporated in the model as latent
+variables.")
+ (license license:gpl3)))
+
(define-public r-biocversion
(package
(name "r-biocversion")

base-commit: e74fa406e1043547242a8b67ab9907fea7aae6b9
--
2.36.1
R
R
Ricardo Wurmus wrote on 31 Oct 2022 21:42
(address . 56143-done@debbugs.gnu.org)
87wn8fbu7q.fsf@elephly.net
Applied, thanks!

--
Ricardo
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