[PATCH] gnu: Add r-asgsca.

Mădălin Ionel Patrașcu wrote on 22 Jun 16:07 +0200

Recipients:(address . guix-patches@gnu.org)

Message-ID:20220622140705.17936-1-madalinionel.patrascu@mdc-berlin.de

* gnu/packages/bioconductor.scm (r-asgsca): New variable.

---

gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++

1 file changed, 24 insertions(+)

Toggle diff (39 lines)diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e87b190c2..fba3004e8d 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2029,6 +2029,30 @@ (define-public r-aneufinder
 sequencing data.")
     (license license:artistic2.0)))
 
+(define-public r-asgsca
+  (package
+    (name "r-asgsca")
+    (version "1.30.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "ASGSCA" version))
+              (sha256
+               (base32
+                "0mxrrkm2lg7gxjh8ynn6qmryn8wqda7b83sr51dpgblay83jcbaq"))))
+    (properties `((upstream-name . "ASGSCA")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-mass r-matrix))
+    (home-page "https://bioconductor.org/packages/ASGSCA")
+    (synopsis
+     "Analysis of the associations between multiple genotypes and multiple traits")
+    (description
+     "The package @dfn{ASGSCA} (Association Study using Generalized Structured
+Component Analysis) provides tools to model and test the association between
+multiple genotypes and multiple traits, taking into account the prior biological
+knowledge.  Genes, and clinical pathways are incorporated in the model as latent
+variables.")
+    (license license:gpl3)))
+
 (define-public r-biocversion
   (package
     (name "r-biocversion")

base-commit: e74fa406e1043547242a8b67ab9907fea7aae6b9
-- 
2.36.1