Mădălin Ionel Patrașcu wrote 3 years ago
(address . guix-patches@gnu.org)
20220502093734.30444-1-madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioconductor.scm (r-agimicrorna): New variable.
---
gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++
1 file changed, 30 insertions(+)
Toggle diff (45 lines)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index a78903becc..78075de4e0 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1877,6 +1877,36 @@ (define-public r-agilp
;; GPLv3.
(license license:gpl3)))
+(define-public r-agimicrorna
+ (package
+ (name "r-agimicrorna")
+ (version "2.46.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "AgiMicroRna" version))
+ (sha256
+ (base32
+ "0jic89gyphbv7jzlfgm9bh1aq48lp86rq6hr34gsg9z0pa1192xa"))))
+ (properties `((upstream-name . "AgiMicroRna")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-affy
+ r-affycoretools
+ r-biobase
+ r-limma
+ r-preprocesscore))
+ (home-page "https://git.bioconductor.org/packages/AgiMicroRna")
+ (synopsis
+ "Processing and differential expression analysis of Agilent microRNA chips")
+ (description
+ "@code{AgiMicroRna} provides useful functionality for the processing, quality
+assessment and differential expression analysis of Agilent microRNA array data.
+The package uses a limma-like structure to generate the processed data in order
+to make statistical inferences about differential expression using the linear
+model features implemented in limma. Standard Bioconductor objects are used so
+that other packages could be used as well.")
+ (license license:gpl3)))
+
(define-public r-aneufinder
(package
(name "r-aneufinder")
base-commit: 098f2eea331121905e3c867f478b22cea3510841
--
2.36.0