[PATCH] gnu: Add r-adsplit.

DoneSubmitted by Mădălin Ionel Patrașcu.
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  • Mădălin Ionel Patrașcu
  • Ricardo Wurmus
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M
M
Mădălin Ionel Patrașcu wrote on 26 Apr 16:07 +0200
(address . guix-patches@gnu.org)
20220426140709.16637-1-madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioconductor.scm (r-adsplit): New variable.
---
gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)

Toggle diff (42 lines)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index fa862d736f..f0a7359590 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1616,6 +1616,33 @@ (define-public r-adam
 functionally associated genes} (GFAG).")
     (license license:gpl2+)))
 
+(define-public r-adsplit
+  (package
+    (name "r-adsplit")
+    (version "1.64.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "adSplit" version))
+              (sha256
+               (base32
+                "1b4ck371h3a76m5h0brvlzsyg1g6q5fjrhra5hqv9pwxr330h9r2"))))
+    (properties `((upstream-name . "adSplit")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-annotationdbi
+                             r-biobase
+                             r-cluster
+                             r-go-db
+                             r-keggrest
+                             r-multtest))
+    (home-page "http://compdiag.molgen.mpg.de/software/adSplit.shtml")
+    (synopsis "Annotation-driven splits in microarray data")
+    (description
+     "This package implements clustering of microarray gene expression profiles
+according to functional annotations.  For each term genes are annotated to,
+splits into two subclasses are computed and a significance of the supporting
+gene set is determined.")
+    (license license:gpl2+)))
+
 (define-public r-aneufinder
   (package
     (name "r-aneufinder")

base-commit: 30ff557bd7255dddec16f4a032e58f5a88d5e448
-- 
2.34.0
R
R
Ricardo Wurmus wrote on 27 Apr 16:09 +0200
(name . Mădălin Ionel Patrașcu)(address . madalinionel.patrascu@mdc-berlin.de)(address . 55127-done@debbugs.gnu.org)
87o80m4ny6.fsf@elephly.net
Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> writes:

Toggle quote (2 lines)
> * gnu/packages/bioconductor.scm (r-adsplit): New variable.

Applied with stylistic changes. Thank you!

--
Ricardo
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