[PATCH] gnu: Add r-acgh.

DoneSubmitted by Mădălin Ionel Patrașcu.
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2 participants
  • Mădălin Ionel Patrașcu
  • Ricardo Wurmus
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M
Mădălin Ionel Patrașcu wrote on 13 Apr 14:21 +0200
(address . guix-patches@gnu.org)
20220413122138.29268-1-madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioconductor.scm (r-acgh): New variable.
---
gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)

Toggle diff (37 lines)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 803437a033..9a7a46502c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -11642,6 +11642,30 @@ (define-public r-universalmotif
 motifs, and others.")
     (license license:gpl3)))
 
+(define-public r-acgh
+  (package
+    (name "r-acgh")
+    (version "1.72.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "aCGH" version))
+              (sha256
+               (base32
+                "1r1q6iq3g7svfn5m4jxlxp413djb40mvf6lh595y86sgwav5k6l4"))))
+    (properties `((upstream-name . "aCGH")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-biobase r-cluster r-multtest r-survival))
+    (home-page "https://bioconductor.org/packages/aCGH")
+    (synopsis
+     "Classes and functions for array comparative genomic hybridization data")
+    (description
+     "This package provides functions for reading
+@dfn{array comparative genomic hybridization} (aCGH) data from image analysis
+output files and clone information files, creation of @code{aCGH} objects for
+storing these data.  Basic methods are accessing/replacing, subsetting,
+printing and plotting @code{aCGH} objects.")
+    (license license:gpl2)))
+
 ;; This is a CRAN package, but it depends on Bioconductor packages, so we put
 ;; it here.
 (define-public r-activedriverwgs
-- 
2.34.0
R
R
Ricardo Wurmus wrote on 14 Apr 11:59 +0200
(address . 54909-done@debbugs.gnu.org)
87v8vcvvc8.fsf@elephly.net
Applied, thanks!

--
Ricardo
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