Mădălin Ionel Patrașcu wrote 3 years ago
(address . guix-patches@gnu.org)
20220413122138.29268-1-madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioconductor.scm (r-acgh): New variable.
---
gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
Toggle diff (37 lines)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 803437a033..9a7a46502c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -11642,6 +11642,30 @@ (define-public r-universalmotif
motifs, and others.")
(license license:gpl3)))
+(define-public r-acgh
+ (package
+ (name "r-acgh")
+ (version "1.72.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "aCGH" version))
+ (sha256
+ (base32
+ "1r1q6iq3g7svfn5m4jxlxp413djb40mvf6lh595y86sgwav5k6l4"))))
+ (properties `((upstream-name . "aCGH")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biobase r-cluster r-multtest r-survival))
+ (home-page "https://bioconductor.org/packages/aCGH")
+ (synopsis
+ "Classes and functions for array comparative genomic hybridization data")
+ (description
+ "This package provides functions for reading
+@dfn{array comparative genomic hybridization} (aCGH) data from image analysis
+output files and clone information files, creation of @code{aCGH} objects for
+storing these data. Basic methods are accessing/replacing, subsetting,
+printing and plotting @code{aCGH} objects.")
+ (license license:gpl2)))
+
;; This is a CRAN package, but it depends on Bioconductor packages, so we put
;; it here.
(define-public r-activedriverwgs
--
2.34.0