[PATCH] gnu: Add r-acde.

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2 participants
  • M?d?lin Ionel Patra?cu
  • Ricardo Wurmus
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M?d?lin Ionel Patra?cu
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normal
M
M
M?d?lin Ionel Patra?cu wrote on 13 Apr 2022 00:30
(address . guix-patches@gnu.org)
20220412223047.9620-1-madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioconductor.scm (r-acde): New variable.
---
gnu/packages/bioconductor.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)

Toggle diff (38 lines)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 803437a033..87cbbb24fc 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -11642,6 +11642,31 @@ (define-public r-universalmotif
motifs, and others.")
(license license:gpl3)))
+(define-public r-acde
+ (package
+ (name "r-acde")
+ (version "1.24.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "acde" version))
+ (sha256
+ (base32
+ "13ks87am73m3bjn9ljapxml2a9cxdpgv9flwvly8aqmi3ndxyqi6"))))
+ (properties `((upstream-name . "acde")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-boot))
+ (home-page "https://bioconductor.org/packages/acde")
+ (synopsis
+ "Identification of differentially expressed genes with artificial components")
+ (description
+ "This package provides a multivariate inferential analysis method for
+detecting differentially expressed genes in gene expression data. It uses
+artificial components, close to the data's principal components but with an
+exact interpretation in terms of differential genetic expression, to identify
+differentially expressed genes while controlling the @dfn{false discovery rate}
+(FDR).")
+ (license license:gpl3)))
+
;; This is a CRAN package, but it depends on Bioconductor packages, so we put
;; it here.
(define-public r-activedriverwgs
--
2.34.0
R
R
Ricardo Wurmus wrote on 14 Apr 2022 13:18
(address . 54897-done@debbugs.gnu.org)
87a6cnx69c.fsf@elephly.net
Applied, thanks!

--
Ricardo
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