[PATCH] gnu: Add r-acde.

DoneSubmitted by Mădălin Ionel Patrașcu.
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2 participants
  • Mădălin Ionel Patrașcu
  • Ricardo Wurmus
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M
M
Mădălin Ionel Patrașcu wrote on 13 Apr 00:30 +0200
(address . guix-patches@gnu.org)
20220412223047.9620-1-madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioconductor.scm (r-acde): New variable.
---
gnu/packages/bioconductor.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)

Toggle diff (38 lines)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 803437a033..87cbbb24fc 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -11642,6 +11642,31 @@ (define-public r-universalmotif
 motifs, and others.")
     (license license:gpl3)))
 
+(define-public r-acde
+  (package
+    (name "r-acde")
+    (version "1.24.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "acde" version))
+              (sha256
+               (base32
+                "13ks87am73m3bjn9ljapxml2a9cxdpgv9flwvly8aqmi3ndxyqi6"))))
+    (properties `((upstream-name . "acde")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-boot))
+    (home-page "https://bioconductor.org/packages/acde")
+    (synopsis
+     "Identification of differentially expressed genes with artificial components")
+    (description
+     "This package provides a multivariate inferential analysis method for
+detecting differentially expressed genes in gene expression data.  It uses
+artificial components, close to the data's principal components but with an
+exact interpretation in terms of differential genetic expression, to identify
+differentially expressed genes while controlling the @dfn{false discovery rate}
+(FDR).")
+    (license license:gpl3)))
+
 ;; This is a CRAN package, but it depends on Bioconductor packages, so we put
 ;; it here.
 (define-public r-activedriverwgs
-- 
2.34.0
R
R
Ricardo Wurmus wrote on 14 Apr 13:18 +0200
(address . 54897-done@debbugs.gnu.org)
87a6cnx69c.fsf@elephly.net
Applied, thanks!

--
Ricardo
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