Mădălin Ionel Patrașcu wrote 3 years ago
(address . guix-patches@gnu.org)
20220412223047.9620-1-madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioconductor.scm (r-acde): New variable.
---
gnu/packages/bioconductor.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
Toggle diff (38 lines)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 803437a033..87cbbb24fc 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -11642,6 +11642,31 @@ (define-public r-universalmotif
motifs, and others.")
(license license:gpl3)))
+(define-public r-acde
+ (package
+ (name "r-acde")
+ (version "1.24.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "acde" version))
+ (sha256
+ (base32
+ "13ks87am73m3bjn9ljapxml2a9cxdpgv9flwvly8aqmi3ndxyqi6"))))
+ (properties `((upstream-name . "acde")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-boot))
+ (home-page "https://bioconductor.org/packages/acde")
+ (synopsis
+ "Identification of differentially expressed genes with artificial components")
+ (description
+ "This package provides a multivariate inferential analysis method for
+detecting differentially expressed genes in gene expression data. It uses
+artificial components, close to the data's principal components but with an
+exact interpretation in terms of differential genetic expression, to identify
+differentially expressed genes while controlling the @dfn{false discovery rate}
+(FDR).")
+ (license license:gpl3)))
+
;; This is a CRAN package, but it depends on Bioconductor packages, so we put
;; it here.
(define-public r-activedriverwgs
--
2.34.0