Mădălin Ionel Patrașcu wrote 4 years ago
(address . guix-patches@gnu.org)(address . rekado@elephly.net)(name . Mădălin Ionel Patrașcu)(address . madalinionel.patrascu@mdc-berlin.de)
20210211210329.20176-1-madalinionel.patrascu@mdc-berlin.de
* gnu/packages/bioinformatics.scm (bowtie1): Update to 1.3.0.
---
gnu/packages/bioinformatics.scm | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
Toggle diff (33 lines)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index cbf08c5dd2..ab149d6aad 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1654,14 +1654,14 @@ gapped, local, and paired-end alignment modes.")
(define-public bowtie1
(package
(name "bowtie1")
- (version "1.2.3")
+ (version "1.3.0")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/bowtie-bio/bowtie/"
- version "/bowtie-src-x86_64.zip"))
+ version "/bowtie-" version "-src.zip"))
(sha256
(base32
- "0vmiqdhc9dzyfy9sh6vgi7k9xy2hiw8g87vbamnc6cgpm179zsa4"))
+ "11dbihdnrizc6qhx9xsw77w3q5ssx642alaqzvhxx32ak9glvq04"))
(modules '((guix build utils)))
(snippet
'(substitute* "Makefile"
@@ -1672,7 +1672,7 @@ gapped, local, and paired-end alignment modes.")
(arguments
'(#:tests? #f ; no "check" target
#:make-flags
- (list "all"
+ (list "CC=gcc" "all"
(string-append "prefix=" (assoc-ref %outputs "out")))
#:phases
(modify-phases %standard-phases
--
2.30.0