Cannot upgrade due to "guix pull" errors

DoneSubmitted by Adam Bolte.
Details
5 participants
  • Adam Bolte
  • Ben Sturmfels
  • Efraim Flashner
  • Ludovic Courtès
  • Tomáš Čech
Owner
unassigned
Severity
normal
A
A
Adam Bolte wrote on 20 Sep 2017 05:08
(address . bug-guix@gnu.org)
20170920030859.4pt5zmppre6rjp3g@abolte-desktop.users
Hi there,
I'm running Guix 0.10.0 on a Debian stretch box, and I'd like toupgrade. The box had not been booted for quite some time, hence theversion is somewhat old.
Running `guix pull`, I get the following:

Starting download of /tmp/guix-file.k6X14mFrom http://git.savannah.gnu.org/cgit/guix.git/snapshot/master.tar.gz... master.tar.gz 628KiB/s 00:22 | 13.6MiB transferredunpacking '/gnu/store/i17ynp73h182q1n72a6nqsyxk32fkhhr-guix-latest.tar.gz'...Your installation is too old and lacks a 'guile2.0-git' package.Please upgrade to an intermediate version first, for instance with:
guix pull --url=https://git.savannah.gnu.org/cgit/guix.git/snapshot/v0.13.0.tar.gz

Unfortunately, the suggested command fails as follows:

Starting download of /tmp/guix-file.cWnKqPFrom https://git.savannah.gnu.org/cgit/guix.git/snapshot/v0.13.0.tar.gz... v0.13.0.tar.gz 641KiB/s 00:21 | 13.1MiB transferred unpacking '/gnu/store/2xjmgdqac5bczsgg3z0ccpgrvmsfv5cr-guix-latest.tar.gz'... guix pull: warning: ambiguous package specification `guile@2.0' guix pull: warning: choosing guile-2.0.11 from gnu/packages/bootstrap.scm:145:4 substitute: warning: failed to install locale: Invalid argument substitute: updating list of substitutes from 'https://mirror.hydra.gnu.org'... 100.0% substitute: updating list of substitutes from 'https://hydra.gnu.org'... 100.0%The following derivations will be built: /gnu/store/5c6cqg3bqsh8rfkmcvc5sa2ncadcbm2j-guix-latest.drv /gnu/store/vx3qbgs1xywhln31psv99gfqdq49lydv-boost_1_60_0.tar.bz2.drv /gnu/store/y4jpd15v5xdfw8dz7fvv25vmxcdi1y8c-boost-1.60.0.drv /gnu/store/4csm8dx2v2wbl4l2zp9zgv9h4qq2h9ab-scons-2.3.4.drv /gnu/store/limzfb91ccdlzvkhi7hzak1klpqxbhnn-serf-1.3.8.tar.xz.drv /gnu/store/abndxwmy1lhpdylw4k8mzb3nazmikppb-subversion-1.8.15.tar.bz2.drv /gnu/store/rbknpvrncpv3qhx1fx7lklqj0dypxr6w-serf-1.3.8.drv /gnu/store/vf2wr6d8cvz4a1f8qw2ighd4x0wmxfv3-swig-3.0.5.drv /gnu/store/gv7xsivnh1r9fgrnmyyjsab4mm5bll6i-subversion-1.8.15.drv /gnu/store/vfvam64y64b5aca6lkcg71rzc6m6pxd1-git-2.7.3.tar.xz.drv /gnu/store/fkapgp78jsx2bhxix1jwkgaxal9p41nk-git-2.7.3.drv /gnu/store/7vfdyy41j5zyfs51w5r6hpqr2lmfhxs2-cmake-3.3.2.tar.gz.drv /gnu/store/mkr49c1c1zpwvm9acs23b307praczr7s-fontconfig-2.11.94.tar.bz2.drv /gnu/store/iib86yglfaps3mykli4y71clan58b5si-libxft-2.3.2.drv /gnu/store/rvvgg62pla0k1bzwvcmsbsxljl4gcq03-tk8.6.4-src.tar.xz.drv /gnu/store/xwf3ghfi8761zv5kpx4s4zbfs5ys598p-fontconfig-2.11.94.drv /gnu/store/pabihqw4qbi235pkhx265alj2sqwxhv2-tk-8.6.4.drv /gnu/store/zyp81jj5k1mwszas7jj5ppp325pxs7ld-freetype-2.6.tar.bz2.drv /gnu/store/5fpjc6zgpfw7jvazn18pyrv47jcwnx12-freetype-2.6.drv /gnu/store/gf5qa80fz34inry2iz4k1ylvrbsn9dff-python-wrapper-3.4.3.drv /gnu/store/rfyihinww24210qh4sz7yf390lq4rvrf-python-3.4.3.drv /gnu/store/7570p35p47pblb9lclyx992mj21g7s5v-ghostscript-9.14.0.drv /gnu/store/jbq0w5nkrqaaxylfykh4wnldfq3xrjps-psutils-17.drv /gnu/store/xfzb00gaiscn2c6p3jnl0601zgi3mbn9-netpbm-10.61.01.drv /gnu/store/qvnl9crkiss0ni0gib2srllby2jgrq08-openldap-2.4.42.tgz.drv /gnu/store/3dzydc146ydj1rmxih2liw6f2jzis054-openldap-2.4.42.drv /gnu/store/n067prxks8z82vryaxyjf43dms9wpaq3-groff-1.22.3.drv /gnu/store/nzpksqfw6k5p6zbsdp48hd1m0ax95h7d-python-2.7.10.drv /gnu/store/6lfgxxd2d82s1clqqmaarm9vjyzhsfp2-libarchive-3.1.2.tar.gz.drv /gnu/store/3l08f3q0h93c64vxxxvw3zm5170x36k8-libarchive-3.1.2.tar.xz.drv /gnu/store/c05g4i3bmbahn8ycnyln3xp4ki3dwjyz-libarchive-3.1.2.drv /gnu/store/jk2dkyqjqkb60hdh62w88h582l63w3is-curl-7.47.0.drv /gnu/store/kpxj7cxmb4mxsmiyrc29wya5yxc6x4ay-cmake-3.3.2.tar.xz.drv /gnu/store/s6f859blwbgr291mfx7nbbd01q2dkvg3-libssh-0.6.5.tar.xz.drv /gnu/store/c9c8mlqi38bk5p91q3jjf26hvl8yx80h-libssh-0.6.5.tar.xz.drv /gnu/store/mynphq65zzsqjkisx620lrdd9nlpi5bc-cmake-3.3.2.drv /gnu/store/1wbg08m1gcssyipysplfzdgx0r6m11kb-libssh-0.6.5.drv /gnu/store/4x93iwmdvpyxd3zv38n8fzmjv7v8g711-guile-ssh-0.9.0-checkout.drv /gnu/store/fl828nnlvsx232g5srikiqv4hwx3drxg-guile-ssh-0.9.0.drvThe following files will be downloaded: /gnu/store/krnzsddzfbk1kdv0al2q7g7rnpw4k85j-libxext-1.3.3 /gnu/store/i3zpc6rhc6mdn0wwf4sw8x1apdj1vlcf-libxrender-0.9.9fetching path `/gnu/store/krnzsddzfbk1kdv0al2q7g7rnpw4k85j-libxext-1.3.3'...warning: failed to install locale: Invalid argumentwarning: failed to install locale: Invalid argument
Found valid signature for /gnu/store/krnzsddzfbk1kdv0al2q7g7rnpw4k85j-libxext-1.3.3From https://mirror.hydra.gnu.org/guix/nar/gzip/krnzsddzfbk1kdv0al2q7g7rnpw4k85j-libxext-1.3.3Downloading krnzsd...-libxext-1.3.3 (443KiB installed)... https://mirror.hydra.gnu.org/.../krnzsddzfbk1kdv0al2q7g7rnpw4k85j-libxext-1.3.3 141KiB 171KiB/s 00:01 [####################] 100.0%% fetching path `/gnu/store/i3zpc6rhc6mdn0wwf4sw8x1apdj1vlcf-libxrender-0.9.9'... warning: failed to install locale: Invalid argument
Found valid signature for /gnu/store/i3zpc6rhc6mdn0wwf4sw8x1apdj1vlcf-libxrender-0.9.9From https://mirror.hydra.gnu.org/guix/nar/gzip/i3zpc6rhc6mdn0wwf4sw8x1apdj1vlcf-libxrender-0.9.9Downloading i3zpc6...-libxrender-0.9.9 (136KiB installed)... https://mirror.hydra.gnu.org/.../i3zpc6rhc6mdn0wwf4sw8x1apdj1vlcf-libxrender-0.9.9 44KiB 124KiB/s 00:00 [####################] 100.0%% building path(s) `/gnu/store/a87qvpwalb2nd2d58qvgf0a3rzdhfrl6-boost_1_60_0.tar.bz2'
Starting download of /gnu/store/a87qvpwalb2nd2d58qvgf0a3rzdhfrl6-boost_1_60_0.tar.bz2From http://prdownloads.sourceforge.net/boost/boost_1_60_0.tar.bz2...following redirection to `http://downloads.sourceforge.net/project/boost/boost/1.60.0/boost_1_60_0.tar.bz2'...following redirection to `https://nchc.dl.sourceforge.net/project/boost/boost/1.60.0/boost_1_60_0.tar.bz2'...;;; Failed to autoload make-session in (gnutls):;;; ERROR: missing interface for module (gnutls)ERROR: In procedure module-lookup: Unbound variable: make-session
Starting download of /gnu/store/a87qvpwalb2nd2d58qvgf0a3rzdhfrl6-boost_1_60_0.tar.bz2From http://heanet.dl.sourceforge.net/sourceforge/boost/boost_1_60_0.tar.bz2...ERROR: download failed "http://heanet.dl.sourceforge.net/sourceforge/boost/boost_1_60_0.tar.bz2"404 "Not Found"
Starting download of /gnu/store/a87qvpwalb2nd2d58qvgf0a3rzdhfrl6-boost_1_60_0.tar.bz2From http://surfnet.dl.sourceforge.net/sourceforge/boost/boost_1_60_0.tar.bz2...ERROR: In procedure getaddrinfo: Name or service not known
Starting download of /gnu/store/a87qvpwalb2nd2d58qvgf0a3rzdhfrl6-boost_1_60_0.tar.bz2From http://dfn.dl.sourceforge.net/sourceforge/boost/boost_1_60_0.tar.bz2...ERROR: In procedure getaddrinfo: Name or service not known
Starting download of /gnu/store/a87qvpwalb2nd2d58qvgf0a3rzdhfrl6-boost_1_60_0.tar.bz2From http://mesh.dl.sourceforge.net/sourceforge/boost/boost_1_60_0.tar.bz2...ERROR: In procedure getaddrinfo: Name or service not known
Starting download of /gnu/store/a87qvpwalb2nd2d58qvgf0a3rzdhfrl6-boost_1_60_0.tar.bz2From http://ovh.dl.sourceforge.net/sourceforge/boost/boost_1_60_0.tar.bz2...ERROR: In procedure getaddrinfo: Name or service not known
Starting download of /gnu/store/a87qvpwalb2nd2d58qvgf0a3rzdhfrl6-boost_1_60_0.tar.bz2From http://osdn.dl.sourceforge.net/sourceforge/boost/boost_1_60_0.tar.bz2...ERROR: download failed "http://osdn.dl.sourceforge.net/sourceforge/boost/boost_1_60_0.tar.bz2"404 "Not Found"failed to download "/gnu/store/a87qvpwalb2nd2d58qvgf0a3rzdhfrl6-boost_1_60_0.tar.bz2" from "mirror://sourceforge/boost/boost_1_60_0.tar.bz2"builder for `/gnu/store/vx3qbgs1xywhln31psv99gfqdq49lydv-boost_1_60_0.tar.bz2.drv' failed to produce output path `/gnu/store/a87qvpwalb2nd2d58qvgf0a3rzdhfrl6-boost_1_60_0.tar.bz2'cannot build derivation `/gnu/store/y4jpd15v5xdfw8dz7fvv25vmxcdi1y8c-boost-1.60.0.drv': 1 dependencies couldn't be builtbuilding path(s) `/gnu/store/8kx36gyq33lp3mh8hf4fn9r2p2jm3974-cmake-3.3.2.tar.gz'cannot build derivation `/gnu/store/vf2wr6d8cvz4a1f8qw2ighd4x0wmxfv3-swig-3.0.5.drv': 1 dependencies couldn't be builtcannot build derivation `/gnu/store/gv7xsivnh1r9fgrnmyyjsab4mm5bll6i-subversion-1.8.15.drv': 1 dependencies couldn't be builtcannot build derivation `/gnu/store/fkapgp78jsx2bhxix1jwkgaxal9p41nk-git-2.7.3.drv': 1 dependencies couldn't be builtcannot build derivation `/gnu/store/4x93iwmdvpyxd3zv38n8fzmjv7v8g711-guile-ssh-0.9.0-checkout.drv': 1 dependencies couldn't be builtcannot build derivation `/gnu/store/fl828nnlvsx232g5srikiqv4hwx3drxg-guile-ssh-0.9.0.drv': 1 dependencies couldn't be builtcannot build derivation `/gnu/store/5c6cqg3bqsh8rfkmcvc5sa2ncadcbm2j-guix-latest.drv': 1 dependencies couldn't be builtguix pull: error: build failed: build of `/gnu/store/5c6cqg3bqsh8rfkmcvc5sa2ncadcbm2j-guix-latest.drv' failed

I have attempted this multiple times over the last 24 hours, without getting any further.

Some places I have found mention the `--fallback` argument, but thisfeature isn't included in the version I am upgrading from.

$ guix pull --fallbackwarning: failed to install locale: Invalid argumentguix pull: error: fallback: unrecognized option$

It looks like this issue could be the same as was discussed in thisold thread:
https://lists.gnu.org/archive/html/help-guix/2017-05/msg00038.html
I'd prefer not to reinstall, but will if that's my only option.
Thanks,Adamm
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Ben Sturmfels wrote on 20 Sep 2017 06:38
59C1F0B2.8060001@stumbles.id.au
Hi Adam,
On 20/09/17 13:08, Adam Bolte wrote:
Toggle quote (18 lines)> Hi there,> > I'm running Guix 0.10.0 on a Debian stretch box, and I'd like to> upgrade. The box had not been booted for quite some time, hence the> version is somewhat old.> > Running `guix pull`, I get the following:> > > Starting download of /tmp/guix-file.k6X14m> From http://git.savannah.gnu.org/cgit/guix.git/snapshot/master.tar.gz...> master.tar.gz 628KiB/s 00:22 | 13.6MiB transferred> unpacking '/gnu/store/i17ynp73h182q1n72a6nqsyxk32fkhhr-guix-latest.tar.gz'...> Your installation is too old and lacks a 'guile2.0-git' package.> Please upgrade to an intermediate version first, for instance with:> > guix pull --url=https://git.savannah.gnu.org/cgit/guix.git/snapshot/v0.13.0.tar.gz
It looks as though your system is attempting to download and build boost1.60.0, but both Guix's binary substitute and the original source forthe version are no longer available. Given v0.13.0 is the latestrelease, it's a shame if that binary substitute of boost is no longeravailable. Not sure why the source would have disappeared.
There is nearly always a way to work around for issues like this, butgiven how old your install is, I think you'll save a lot of time by justreinstalling. There have been quite few breaking changes in the lastyear that may catch you even if you do resolve the above issue(guix-daemon upgrade, Guile upgrade).
Toggle quote (7 lines)> Some places I have found mention the `--fallback` argument, but this> feature isn't included in the version I am upgrading from.> > $ guix pull --fallback> warning: failed to install locale: Invalid argument> guix pull: error: fallback: unrecognized option
For what it's worth, guix is already falling back to fetching the sourcefrom Sourceforge, so I don't think this flag would help you anyway.
Cheers,Ben
Attachment: signature.asc
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Efraim Flashner wrote on 24 Sep 2017 20:41
(name . Adam Bolte)(address . abolte@systemsaviour.com)(address . 28522@debbugs.gnu.org)
20170924184130.GD26375@macbook42.flashner.co.il
On Wed, Sep 20, 2017 at 01:08:59PM +1000, Adam Bolte wrote:
Toggle quote (21 lines)> Hi there,> > I'm running Guix 0.10.0 on a Debian stretch box, and I'd like to> upgrade. The box had not been booted for quite some time, hence the> version is somewhat old.> > Running `guix pull`, I get the following:> > > Starting download of /tmp/guix-file.k6X14m> From http://git.savannah.gnu.org/cgit/guix.git/snapshot/master.tar.gz...> master.tar.gz 628KiB/s 00:22 | 13.6MiB transferred> unpacking '/gnu/store/i17ynp73h182q1n72a6nqsyxk32fkhhr-guix-latest.tar.gz'...> Your installation is too old and lacks a 'guile2.0-git' package.> Please upgrade to an intermediate version first, for instance with:> > guix pull --url=https://git.savannah.gnu.org/cgit/guix.git/snapshot/v0.13.0.tar.gz> > > Unfortunately, the suggested command fails as follows:>
...snip
Toggle quote (9 lines)>> From http://prdownloads.sourceforge.net/boost/boost_1_60_0.tar.bz2...> following redirection to `http://downloads.sourceforge.net/project/boost/boost/1.60.0/boost_1_60_0.tar.bz2'...> following redirection to `https://nchc.dl.sourceforge.net/project/boost/boost/1.60.0/boost_1_60_0.tar.bz2'...> ;;; Failed to autoload make-session in (gnutls):> ;;; ERROR: missing interface for module (gnutls)> ERROR: In procedure module-lookup: Unbound variable: make-session>
0.10.0 is quite old. Based on the error you're missing gnutls asrequired for getting sources from https locations. I would check theoutput of:
guix package -A gnutls
and then try either gnutls or guile-gnutls in the following command:
guix environment --ad-hoc guile-gnutls -- guix pull --url=https://...v0.13.0.tar.gz

-- Efraim Flashner <efraim@flashner.co.il> אפרים פלשנרGPG key = A28B F40C 3E55 1372 662D 14F7 41AA E7DC CA3D 8351Confidentiality cannot be guaranteed on emails sent or received unencrypted
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Tomáš Čech wrote on 4 Oct 2017 12:16
(name . Adam Bolte)(address . abolte@systemsaviour.com)(address . 28522@debbugs.gnu.org)
20171004101645.h57whznxjrxbzyys@penguin
On Wed, Sep 20, 2017 at 03:08:59AM +0000, Adam Bolte wrote:
Toggle quote (20 lines)>Hi there,>>I'm running Guix 0.10.0 on a Debian stretch box, and I'd like to>upgrade. The box had not been booted for quite some time, hence the>version is somewhat old.>>Running `guix pull`, I get the following:>>>Starting download of /tmp/guix-file.k6X14m>From http://git.savannah.gnu.org/cgit/guix.git/snapshot/master.tar.gz...> master.tar.gz 628KiB/s 00:22 | 13.6MiB transferred>unpacking '/gnu/store/i17ynp73h182q1n72a6nqsyxk32fkhhr-guix-latest.tar.gz'...>Your installation is too old and lacks a 'guile2.0-git' package.>Please upgrade to an intermediate version first, for instance with:>> guix pull --url=https://git.savannah.gnu.org/cgit/guix.git/snapshot/v0.13.0.tar.gz>

And little note based on my recent experience. v0.13.0. doesn't containthe package neither. Use this as middle stage pull:
guix pull --url=https://git.savannah.gnu.org/cgit/guix.git/snapshot/70bc608503f9029a065026a99ec45dbd0ec631c0.tar.gz
That is the commit which defines missing package.
Best regards,
S_W
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Ludovic Courtès wrote on 1 May 2018 22:32
control message for bug #28522
(address . control@debbugs.gnu.org)
87a7tjp15i.fsf@gnu.org
tags 28522 wontfixclose 28522
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