Hi, Janitor [1] patch set. It moves Bioconductor packages from (gnu packages bioinformatics) to (gnu packages bioconductor). 1: To transfer the Copyright, I use: git --no-pager log --date=format:"%Y" --format="%ad %an %s" --grep=r- I did my best to preserve the copyright. But I do not guarantee it is error-free. Well, in doubt, I have been conservative. Then, I do: guix build r- --no-grafts ./pre-inst-env guix build r- --no-grafts --check To avoid a break, I check with: for ci in $(git log --format="%H" -51 --reverse); do ./pre-inst-env guix pull --commit=$ci \ -p /tmp/test-${ci} \ --url=$(pwd) --branch=janitor --disable-authentication done and everyting seems fine. At least, "guix pull" should be checked at the end of the series. Last, I have checked the imported modules in gnu/packages/bioinformatics.scm. All should be fine. Now, I get: --8<---------------cut here---------------start------------->8--- $ ag 'bioconductor' gnu/packages/bioinformatics.scm 69: #:use-module (gnu packages bioconductor) 11550: (synopsis "Extra base functions for Bioconductor") 11553:provided by Bioconductor packages.") --8<---------------cut here---------------end--------------->8--- which ends the move, I guess. Except the package r-rcurl in gnu/packages/statistics.scm, let as an exercise for the reader. ;-) On a side note about the Copyright lines, I did: git blame --date=format:"%Y)" gnu/packages/bioinformatics.scm \ | cut -d')' -f1 | cut -d'(' -f2 | sed 's/ //g' \ | sort | uniq -c and it is possible that there is some "mistake", FWIW. All the best, simon zimoun (50): gnu: r-genomicalignments: Move to (gnu packages bioconductor). gnu: r-rtracklayer: Move to (gnu packages bioconductor). gnu: r-genomicfeatures: Move to (gnu packages bioconductor). gnu: r-topgo: Move to (gnu packages bioconductor). gnu: r-bsgenome: Move to (gnu packages bioconductor). gnu: r-msnid: Move to (gnu packages bioconductor). gnu: r-msnbase: Move to (gnu packages bioconductor). gnu: r-samr: Move to (gnu packages bioconductor). gnu: r-impute: Move to (gnu packages bioconductor). gnu: r-seqpattern: Move to (gnu packages bioconductor). gnu: r-go-db: Move to (gnu packages bioconductor). gnu: r-genomation: Move to (gnu packages bioconductor). gnu: r-genomationdata: Move to (gnu packages bioconductor). gnu: r-pcamethods: Move to (gnu packages bioconductor). gnu: r-mzid: Move to (gnu packages bioconductor). gnu: r-aroma-light: Move to (gnu packages bioconductor). gnu: r-deseq: Move to (gnu packages bioconductor). gnu: r-edaseq: Move to (gnu packages bioconductor). gnu: r-interactivedisplaybase: Move to (gnu packages bioconductor). gnu: r-annotationhub: Move to (gnu packages bioconductor). gnu: r-fastseg: Move to (gnu packages bioconductor). gnu: r-affy: Move to (gnu packages bioconductor). gnu: r-keggrest: Move to (gnu packages bioconductor). gnu: r-gage: Move to (gnu packages bioconductor). gnu: r-complexheatmap: Move to (gnu packages bioconductor). gnu: r-genomicfiles: Move to (gnu packages bioconductor). gnu: r-dirichletmultinomial: Move to (gnu packages bioconductor). gnu: r-organismdbi: Move to (gnu packages bioconductor). gnu: r-affyio: Move to (gnu packages bioconductor). gnu: r-vsn: Move to (gnu packages bioconductor). gnu: r-biovizbase: Move to (gnu packages bioconductor). gnu: r-ensembldb: Move to (gnu packages bioconductor). gnu: r-mzr: Move to (gnu packages bioconductor). gnu: r-protgenerics: Move to (gnu packages bioconductor). gnu: r-sva: Move to (gnu packages bioconductor). gnu: r-motifrg: Move to (gnu packages bioconductor). gnu: r-seqlogo: Move to (gnu packages bioconductor). gnu: r-zlibbioc: Move to (gnu packages bioconductor). gnu: r-rhtslib: Move to (gnu packages bioconductor). gnu: r-bamsignals: Move to (gnu packages bioconductor). gnu: r-rcas: Move to (gnu packages bioconductor). gnu: r-mutationalpatterns: Move to (gnu packages bioconductor). gnu: r-tximport: Move to (gnu packages bioconductor). gnu: r-rhdf5filters: Move to (gnu packages bioconductor). gnu: r-annotationfilter: Move to (gnu packages bioconductor). gnu: r-rhdf5: Move to (gnu packages bioconductor). gnu: r-chipseq: Move to (gnu packages bioconductor). gnu: r-copyhelper: Move to (gnu packages bioconductor). gnu: r-copywriter: Move to (gnu packages bioconductor). gnu: r-methylkit: Move to (gnu packages bioconductor). gnu/packages/bioconductor.scm | 1826 +++++++++++++++++++++++++++++-- gnu/packages/bioinformatics.scm | 1645 ---------------------------- gnu/packages/cran.scm | 30 - 3 files changed, 1749 insertions(+), 1752 deletions(-) base-commit: bd382fae71d899e243e81688bf5baed26171f2ea -- 2.30.1