From debbugs-submit-bounces@debbugs.gnu.org Thu Jun 14 20:42:20 2018 Received: (at submit) by debbugs.gnu.org; 15 Jun 2018 00:42:20 +0000 Received: from localhost ([127.0.0.1]:48696 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fTcom-0004Wr-7h for submit@debbugs.gnu.org; Thu, 14 Jun 2018 20:42:20 -0400 Received: from eggs.gnu.org ([208.118.235.92]:49485) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1fTcol-0004Wd-02 for submit@debbugs.gnu.org; Thu, 14 Jun 2018 20:42:19 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1fTcod-0007wP-Rs for submit@debbugs.gnu.org; Thu, 14 Jun 2018 20:42:13 -0400 X-Spam-Checker-Version: SpamAssassin 3.3.2 (2011-06-06) on eggs.gnu.org X-Spam-Level: X-Spam-Status: No, score=-1.9 required=5.0 tests=BAYES_00,T_DKIM_INVALID autolearn=disabled version=3.3.2 Received: from lists.gnu.org ([2001:4830:134:3::11]:47742) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32) (Exim 4.71) (envelope-from ) id 1fTcod-0007w4-Nt for submit@debbugs.gnu.org; Thu, 14 Jun 2018 20:42:11 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:40408) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1fTcob-0005nO-4y for bug-guix@gnu.org; Thu, 14 Jun 2018 20:42:11 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1fTcoX-0007rC-V6 for bug-guix@gnu.org; Thu, 14 Jun 2018 20:42:09 -0400 Received: from out2-smtp.messagingengine.com ([66.111.4.26]:38153) by eggs.gnu.org with esmtps (TLS1.0:DHE_RSA_AES_256_CBC_SHA1:32) (Exim 4.71) (envelope-from ) id 1fTcoX-0007qu-MI for bug-guix@gnu.org; Thu, 14 Jun 2018 20:42:05 -0400 Received: from compute3.internal (compute3.nyi.internal [10.202.2.43]) by mailout.nyi.internal (Postfix) with ESMTP id C6BEB2188C for ; Thu, 14 Jun 2018 20:42:04 -0400 (EDT) Received: from mailfrontend2 ([10.202.2.163]) by compute3.internal (MEProxy); Thu, 14 Jun 2018 20:42:04 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=stumbles.id.au; h=content-type:date:from:message-id:mime-version:subject:to :x-me-sender:x-me-sender:x-sasl-enc; s=fm3; bh=QWeG1/v3rO3oIZgLs yg8u2unTnQ7qq2gt6oO600GWOM=; b=MEz3geZ8j5Vnr+zfaIj/8i1KAR3sQrSxm MNWLk30INIbuMUxGSWSarU50kXcGYVjmqxxHoDMe56aEqrlBHZWu2Qaz95l6CEdz v3hOdx/fYjGrpgCaQ0eQSKeA1CkwxA29uwVp6DWx/SdpBzZQ2Q/AZLNlsUWLYmbK m+40bzS/agZMep9Y6e2roZG5E6cyq8hKFg0pHMTeknSym+KhL665lcSnq4jRCw7l k/P1rOhtpJblhjOqkUcsPw0TJH2kJBhwcDjF+tG0GeJaw+TFkizbKdGDbI7B2Esj EuynEVhJrckhAppZLYulAeddxENfZiHsHind1XAVyBC1R0+P/v7wg== DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d= messagingengine.com; h=content-type:date:from:message-id :mime-version:subject:to:x-me-sender:x-me-sender:x-sasl-enc; s= fm3; bh=QWeG1/v3rO3oIZgLsyg8u2unTnQ7qq2gt6oO600GWOM=; b=t0PvZrmR 3bXSLdUiYZZMjtaMg7C+uORRvTECDTsefSPm/uVihCe3Kz9GaLZWApf9J/4UlblV e+JsUJpRSMJc9ZIYuMjtM5Qk64tRzkybtPFAGm0ukcD77E82nng6mIejkcAWMASS 25SX/gDYdoFCJnCb9tl9h9dnTCdm013owf0UdIGzZdZEcGueW5ftddtgSPzJFVTn XF3YRnqVDN4rnE4Z4zkBtMGX2AIVxwga6dVCQw0cVqzUU/NtAuHy0xUHArFptpXO 8wRqqK17TEgsBb+AKtFJtbplXqiV+Xtymk4RK53SRU9l2dtim/svfdxQRJefdsIx 1JpwlCSLlZnU9g== X-ME-Proxy: X-ME-Sender: Received: from Marseille (203-214-132-4.perm.iinet.net.au [203.214.132.4]) by mail.messagingengine.com (Postfix) with ESMTPA id A295910273 for ; Thu, 14 Jun 2018 20:42:03 -0400 (EDT) User-agent: mu4e 1.0; emacs 25.3.1 From: Ben Sturmfels To: bug-guix@gnu.org Subject: "make" error on guix master Date: Fri, 15 Jun 2018 10:41:51 +1000 Message-ID: <877en0lw34.fsf@sturm.com.au> MIME-Version: 1.0 Content-Type: multipart/signed; boundary="=-=-="; micalg=pgp-sha512; protocol="application/pgp-signature" X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.2.x-3.x [generic] [fuzzy] X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.6.x X-Received-From: 2001:4830:134:3::11 X-Spam-Score: -4.1 (----) X-Debbugs-Envelope-To: submit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: debbugs-submit-bounces@debbugs.gnu.org Sender: "Debbugs-submit" X-Spam-Score: -5.1 (-----) --=-=-= Content-Type: text/plain Content-Transfer-Encoding: quoted-printable Hi folks, I'm on the current head of Guix master, b494bbe466419dcac9f415c1152131f012b9555e, and I'm getting an error building guix. I've just run a "make clean" and "./bootstrap" prior to the below. Regards, Ben ben@Marseille ~/work/ws/guix [env][master*]$ make /bin/sh ./config.status --recheck running CONFIG_SHELL=3D/bin/sh /bin/sh ./configure --localstatedir=3D/var P= KG_CONFIG_PATH=3D/gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/lib/pk= gconfig --no-create --no-recursion checking for a BSD-compatible install... /gnu/store/53zl5kgyvk1w0bbq61k9xxx= 5hr8hq0c4-profile/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5h= r8hq0c4-profile/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables...=20 checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /gnu/store/53zl5kgyvk1w= 0bbq61k9xxx5hr8hq0c4-profile/bin/grep checking for egrep... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/b= in/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking whether NLS is requested... yes checking for msgfmt... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/= bin/msgfmt checking for gmsgfmt... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile= /bin/msgfmt checking for xgettext... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profil= e/bin/xgettext checking for msgmerge... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profil= e/bin/msgmerge checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for ld used by GCC... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-= profile/bin/ld checking if the linker (/gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile= /bin/ld) is GNU ld... yes checking for shared library run path origin... done checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc checking for sed... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/bin= /sed checking for the Guix system type... x86_64-linux checking for the store directory... /gnu/store checking the length of the installed socket file name... 30 checking for unit test root directory... /home/ben/work/ws/guix/test-tmp checking the length of the socket file name used in tests... 63 checking the length of a typical hash bang line... 73 checking the length of a hash bang line used in tests... 100 checking for pkg-config... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-prof= ile/bin/pkg-config checking pkg-config is at least version 0.9.0... yes configure: checking for guile 2.2 configure: found guile 2.2 checking for guile-2.2... no checking for guile2.2... no checking for guile-2... no checking for guile2... no checking for guile... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/b= in/guile checking for Guile version >=3D 2.2... 2.2.3 checking for guild... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/b= in/guild checking for guile-config... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-pr= ofile/bin/guile-config checking if (gnutls) is available... yes checking if (git) is available... yes checking if (json) is available... yes checking whether Guile-Sqlite3 is available and recent enough... yes checking whether /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/bin/gu= ile provides feature 'regex'... yes checking whether /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/bin/gu= ile provides feature 'posix'... yes checking whether /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/bin/gu= ile provides feature 'socket'... yes checking whether /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/bin/gu= ile provides feature 'net-db'... yes checking whether /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/bin/gu= ile provides feature 'threads'... yes checking whether 'equal?' works for syntax objects... yes checking for a sed that does not truncate output... (cached) /gnu/store/53z= l5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/bin/sed checking for gzip... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/bi= n/gzip checking for bzip2... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/b= in/bzip2 checking for xz... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-profile/bin/= xz checking for nix-instantiate... no checking for nix-hash... no checking for Nixpkgs source tree... not found checking for libgcrypt-config... /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c= 4-profile/bin/libgcrypt-config checking libgcrypt's library directory... /gnu/store/hc5cak3fj0dijbm86kpz2a= sl7ld4gf8y-libgcrypt-1.8.3/lib checking for libgcrypt shared library name... /gnu/store/hc5cak3fj0dijbm86k= pz2asl7ld4gf8y-libgcrypt-1.8.3/lib/libgcrypt checking whether /gnu/store/hc5cak3fj0dijbm86kpz2asl7ld4gf8y-libgcrypt-1.8.= 3/lib/libgcrypt can be dynamically loaded... yes checking zlib's library directory... /gnu/store/fxiwj2wpp11sif613axdax7gmwz= sg6kp-zlib-1.2.11/lib checking for zlib's shared library name... /gnu/store/fxiwj2wpp11sif613axda= x7gmwzsg6kp-zlib-1.2.11/lib/libz checking whether Guile-SSH is available and recent enough... yes checking whether to build daemon... yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking for ar... ar checking the archiver (ar) interface... ar checking whether g++ supports C++11... yes checking for ranlib... ranlib checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for gzdopen in -lz... yes checking how to run the C++ preprocessor... g++ -E checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking for BZ2_bzWriteOpen in -lbz2... yes checking bzlib.h usability... yes checking bzlib.h presence... yes checking for bzlib.h... yes checking for sqlite3 >=3D 3.6.19... yes checking for gcry_md_open in -lgcrypt... yes checking gcrypt.h usability... yes checking gcrypt.h presence... yes checking for gcrypt.h... yes checking for chroot... yes checking for unshare... yes checking sched.h usability... yes checking sched.h presence... yes checking for sched.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking sys/mount.h usability... yes checking sys/mount.h presence... yes checking for sys/mount.h... yes checking sys/syscall.h usability... yes checking sys/syscall.h presence... yes checking for sys/syscall.h... yes checking for lutimes... yes checking for lchown... yes checking for posix_fallocate... yes checking for sched_setaffinity... yes checking for statvfs... yes checking for nanosleep... yes checking for strsignal... yes checking whether it is possible to create a link to a symlink... yes checking locale usability... yes checking locale presence... yes checking for locale... yes checking sys/personality.h usability... yes checking sys/personality.h presence... yes checking for sys/personality.h... yes checking linux/fs.h usability... yes checking linux/fs.h presence... yes checking for linux/fs.h... yes checking for default substitute URLs... https://mirror.hydra.gnu.org checking whether Guile-SSH is available and recent enough... (cached) yes checking for unit test root directory... (cached) /home/ben/work/ws/guix/te= st-tmp checking for guile... (cached) /gnu/store/53zl5kgyvk1w0bbq61k9xxx5hr8hq0c4-= profile/bin/guile checking the current installation's localstatedir... /var checking for emacs... /home/ben/.guix-profile/bin/emacs checking that generated files are newer than configure... done configure: creating ./config.status /bin/sh ./config.status config.status: creating nix/scripts/list-runtime-roots config.status: creating nix/scripts/download config.status: creating nix/scripts/substitute config.status: creating nix/scripts/guix-authenticate config.status: creating nix/scripts/offload config.status: creating Makefile config.status: creating po/guix/Makefile.in config.status: creating po/packages/Makefile.in config.status: creating etc/guix-daemon.cil config.status: creating guix/config.scm config.status: creating test-env config.status: creating pre-inst-env config.status: creating etc/indent-code.el config.status: creating nix/config.h config.status: executing depfiles commands config.status: executing po-directories commands config.status: creating po/guix/POTFILES config.status: creating po/guix/Makefile config.status: creating po/packages/POTFILES config.status: creating po/packages/Makefile GEN nix/libstore/schema.sql.hh make all-recursive make[1]: Entering directory '/home/ben/work/ws/guix' Making all in po/guix make[2]: Entering directory '/home/ben/work/ws/guix/po/guix' make[2]: Leaving directory '/home/ben/work/ws/guix/po/guix' Making all in po/packages make[2]: Entering directory '/home/ben/work/ws/guix/po/packages' make[2]: Leaving directory '/home/ben/work/ws/guix/po/packages' make[2]: Entering directory '/home/ben/work/ws/guix' Updating ./doc/version.texi Updating ./doc/version-fr.texi CXX nix/nix-daemon/guix_daemon-nix-daemon.o CXX nix/nix-daemon/guix_daemon-guix-daemon.o CXX nix/libstore/libstore_a-gc.o CXX nix/libstore/libstore_a-globals.o ^[[B CXX nix/libstore/libstore_a-misc.o CXX nix/libstore/libstore_a-references.o CXX nix/libstore/libstore_a-store-api.o CXX nix/libstore/libstore_a-optimise-store.o CXX nix/libstore/libstore_a-local-store.o CXX nix/libstore/libstore_a-build.o CXX nix/libstore/libstore_a-pathlocks.o CXX nix/libstore/libstore_a-derivations.o CXX nix/libstore/libstore_a-builtins.o CXX nix/libstore/libstore_a-sqlite.o AR libstore.a ar: `u' modifier ignored since `D' is the default (see `U') CXX nix/libutil/libutil_a-archive.o CXX nix/libutil/libutil_a-affinity.o CXX nix/libutil/libutil_a-serialise.o CXX nix/libutil/libutil_a-util.o CXX nix/libutil/libutil_a-hash.o CXX nix/libutil/libutil_a-gcrypt-hash.o AR libutil.a ar: `u' modifier ignored since `D' is the default (see `U') CXX nix/boost/format/libformat_a-free_funcs.o CXX nix/boost/format/libformat_a-parsing.o CXX nix/boost/format/libformat_a-format_implementation.o AR libformat.a ar: `u' modifier ignored since `D' is the default (see `U') CXXLD guix-daemon /gnu/store/l4lr0f5cjd0nbsaaf8b5dmcw1a1yypr3-glibc-2.27/lib/libpthread.so.0:= undefined reference to `__sigtimedwait@GLIBC_PRIVATE' collect2: error: ld returned 1 exit status make[2]: *** [Makefile:3366: guix-daemon] Error 1 make[2]: Leaving directory '/home/ben/work/ws/guix' make[1]: *** [Makefile:4493: all-recursive] Error 1 make[1]: Leaving directory '/home/ben/work/ws/guix' make: *** [Makefile:3144: all] Error 2 --=-=-= Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEPn825zvdanEG+SAhAjwF4snAaPAFAlsjC08ACgkQAjwF4snA aPDuqhAAsN0rcjiaw2IoJBHKpjuVfGu50JtqCzT17XOxCdDDQsBkrdfNxTThAhqW yV0FMgaDPEf/TJzZXReBTkLktabqB4qeVn+TCGRA9bum9FyguRB9CvEPIXp826dZ JlggPAC5k/APZ0X8IMtWdIMCeY4h+9gctrqibQqRHK5lvLj8fFyUKuY8FbV+lhQ1 0nQs4wdHZDsox21sEsKAR2Ef/A+/eSk1uHW5QW85FabBx7hdYl1B9UNqdGfVc94S Z38knVKsGBIcf1RCr5cMZrfyyVOscPozZvOKkQbPV1XIHtQzQPWbzf8NqrVxRoiA IfMqgi84xOmvQTRq2awnF282x9mZBe6vis4oPyOQIqdiYmqg5Ofm+a2f/XOp/Cbh HlIXkW54b5Zdqh0eLp0K45vpJ8Vj+IRuwPk4c7Lt0dHdQInknlu2JrmZpvGXrob8 m6WuhctvAYosEpwYO4dTzTL66IGNqwwZ0PA+s3L/3yZfBDteB+8ohBxHgZItDTTs atpnXyaaPWpLqNuxCXQFQOJrm7TmSQhq+Gj+H00gQGEe0+PNoLORT3ciM0m+Yku+ qYHwAVZx9zSiLAhff4rWOwfkup/Sp1l3cWDuRBYhJAzzSKLVV40jqSVvnHBAomVu K7JXARfE891BGyc8kAIY4P1OMPR6Z7EuP77Kls88BQYwvS84/wg= =iZdf -----END PGP SIGNATURE----- --=-=-=--