(address . guix-patches@gnu.org)
20191216124626.048f0e43@sybil.lepiller.eu
Hi Guix!
Since there was some interest very recently, I took another look at my
incomplete why3 and frama-c packages. I updated them and polished them
a little. I encourage formal-method guixers to test these patches,
especially if you are a user of why3 or frama-c, because I'm not sure
how these tools are supposed to be working.
Note that I didn't include ide support in why3 because this adds ~1GiB
to the closure of the program. A good thing could be to separate the
why3 library (not required when using why3) from the main package, in a
separate output.
For some reason, frama-c doesn't work directly, it needs to be in an
environment where its dependencies are present, hence the propagation.
However, it's failing at runtime:
$ guix environment --ad-hoc frama-c ocaml ocaml-findlib
[env]$ frama-c --help
[kernel] User Error: cannot load plug-in 'zip': cannot load
module Details: error loading shared library:
/gnu/store/hsjnvq5li28ak2wjnwlmqsfbg246skcg-profile/lib/ocaml/site-lib/zip/zip.cmxa:
invalid ELF header [kernel] User Error: cannot load plug-in 'why3':
cannot load module Details: error loading shared library:
/gnu/store/hsjnvq5li28ak2wjnwlmqsfbg246skcg-profile/lib/ocaml/site-lib/why3/why3.cmxs:
undefined symbol: camlGzip [kernel] User Error: cannot load plug-in
'frama-c-wp': cannot load module Details: error loading shared library:
/gnu/store/daqn9vsc15j3slbalw2fag6amndv8x98-frama-c-20.0/lib/frama-c/plugins/top/Wp.cmxs:
undefined symbol: camlWhy3__Theory [kernel] User Error: Deferred error
message was emitted during execution. See above messages for more
information. [kernel] Frama-C aborted: invalid user input.
From 9fc13943b29196763524ddbc247218398d889459 Mon Sep 17 00:00:00 2001
From: Julien Lepiller <julien@lepiller.eu>
Date: Mon, 16 Dec 2019 12:09:16 +0100
Subject: [PATCH 1/2] gnu: Add why3.
* gnu/packages/maths.scm (why3): New variable.
---
gnu/packages/maths.scm | 67 +++++++++++++++++++++++++++++++++++++++++-
1 file changed, 66 insertions(+), 1 deletion(-)
Toggle diff (112 lines)
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 0ed61ad4a1..991f164737 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -28,7 +28,7 @@
;;; Copyright © 2018 Adam Massmann <massmannak@gmail.com>
;;; Copyright © 2018 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2018 Eric Brown <brown@fastmail.com>
-;;; Copyright © 2018 Julien Lepiller <julien@lepiller.eu>
+;;; Copyright © 2018, 2019 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2018 Amin Bandali <bandali@gnu.org>
;;; Copyright © 2019 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2019 Steve Sprang <scs@stevesprang.com>
@@ -61,6 +61,7 @@
#:use-module ((guix build utils) #:select (alist-replace))
#:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)
+ #:use-module (guix build-system ocaml)
#:use-module (guix build-system python)
#:use-module (guix build-system ruby)
#:use-module (gnu packages algebra)
@@ -72,10 +73,12 @@
#:use-module (gnu packages check)
#:use-module (gnu packages cmake)
#:use-module (gnu packages compression)
+ #:use-module (gnu packages coq)
#:use-module (gnu packages curl)
#:use-module (gnu packages cyrus-sasl)
#:use-module (gnu packages documentation)
#:use-module (gnu packages elf)
+ #:use-module (gnu packages emacs)
#:use-module (gnu packages flex)
#:use-module (gnu packages fltk)
#:use-module (gnu packages fontutils)
@@ -101,6 +104,7 @@
#:use-module (gnu packages mpi)
#:use-module (gnu packages multiprecision)
#:use-module (gnu packages netpbm)
+ #:use-module (gnu packages ocaml)
#:use-module (gnu packages onc-rpc)
#:use-module (gnu packages pcre)
#:use-module (gnu packages popt)
@@ -4182,6 +4186,67 @@ as equations, scalars, vectors, and matrices.")
theories} (SMT) solver. It provides a C/C++ API, as well as Python bindings.")
(license license:expat)))
+(define-public why3
+ (package
+ (name "why3")
+ (version "1.2.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://gforge.inria.fr/frs/download.php/file"
+ "/38185/why3-" version ".tar.gz"))
+ (sha256
+ (base32
+ "014gkwisjp05x3342zxkryb729p02ngx1hcjjsrplpa53jzgz647"))))
+ (build-system ocaml-build-system)
+ (native-inputs
+ `(("coq" ,coq)
+ ("ocaml" ,ocaml)
+ ("which" ,which)))
+ (propagated-inputs
+ `(("camlzip" ,camlzip)
+ ("ocaml-graph" ,ocaml-graph)
+ ("ocaml-menhir" ,ocaml-menhir)
+ ("ocaml-num" ,ocaml-num)
+ ("ocaml-zarith" ,ocaml-zarith)))
+ (inputs
+ `(("coq-flocq" ,coq-flocq)
+ ("emacs-minimal" ,emacs-minimal)
+ ("zlib" ,zlib)))
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-before 'configure 'fix-configure
+ (lambda _
+ (setenv "CONFIG_SHELL" (which "sh"))
+ (substitute* "configure"
+ ;; find ocaml-num in the correct directory
+ (("\\$DIR/nums.cma") "$DIR/../nums.cma")
+ (("\\$DIR/num.cmi") "$DIR/../num.cmi"))
+ #t))
+ (add-after 'configure 'fix-makefile
+ (lambda _
+ (substitute* "Makefile"
+ ;; find ocaml-num in the correct directory
+ (("site-lib/num") "site-lib"))
+ #t))
+ (add-after 'install 'install-lib
+ (lambda _
+ (invoke "make" "byte")
+ (invoke "make" "install-lib")
+ #t)))))
+ (home-page "http://why3.lri.fr")
+ (synopsis "Deductive program verification")
+ (description "Why3 provides a language for specification and programming,
+called WhyML, and relies on external theorem provers, both automated and
+interactive, to discharge verification conditions. Why3 comes with a standard
+library of logical theories (integer and real arithmetic, Boolean operations,
+sets and maps, etc.) and basic programming data structures (arrays, queues,
+hash tables, etc.). A user can write WhyML programs directly and get
+correct-by-construction OCaml programs through an automated extraction
+mechanism. WhyML is also used as an intermediate language for the verification
+of C, Java, or Ada programs.")
+ (license license:lgpl2.1)))
+
(define-public elpa
(package
(name "elpa")
--
2.24.0
From f9501f1cc5725d49c69c948f6f7cc70c13f1dbdc Mon Sep 17 00:00:00 2001
From: Julien Lepiller <julien@lepiller.eu>
Date: Mon, 16 Dec 2019 12:40:18 +0100
Subject: [PATCH 2/2] gnu: Add frama-c.
* gnu/packages/maths.scm (frama-c): New variable.
---
gnu/packages/maths.scm | 38 ++++++++++++++++++++++++++++++++++++++
1 file changed, 38 insertions(+)
Toggle diff (51 lines)
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 991f164737..d4e3e74c98 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -4247,6 +4247,44 @@ mechanism. WhyML is also used as an intermediate language for the verification
of C, Java, or Ada programs.")
(license license:lgpl2.1)))
+(define-public frama-c
+ (package
+ (name "frama-c")
+ (version "20.0")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "http://frama-c.com/download/frama-c-"
+ version "-Calcium.tar.gz"))
+ (sha256
+ (base32
+ "03dvn162djylj2skmk6vv75gh87mm4s5cspkzcrlm5x0rlla2yqn"))))
+ (build-system ocaml-build-system)
+ (arguments
+ `(#:tests? #f; no test target in Makefile
+ #:phases
+ (modify-phases %standard-phases
+ (add-before 'configure 'export-shell
+ (lambda* (#:key inputs #:allow-other-keys)
+ (setenv "CONFIG_SHELL" (string-append (assoc-ref inputs "bash")
+ "/bin/sh"))
+ #t)))))
+ (inputs
+ `(("gmp" ,gmp)))
+ (propagated-inputs
+ `(("ocaml-biniou" ,ocaml-biniou)
+ ("ocaml-easy-format" ,ocaml-easy-format)
+ ("ocaml-graph" ,ocaml-graph)
+ ("ocaml-yojson" ,ocaml-yojson)
+ ("ocaml-zarith" ,ocaml-zarith)
+ ("why3" ,why3)))
+ (home-page "http://frama-c.com")
+ (synopsis "C source code analysis platform")
+ (description "Frama-C is an extensible and collaborative platform dedicated
+to source-code analysis of C software. The Frama-C analyzers assist you in
+various source-code-related activities, from the navigation through unfamiliar
+projects up to the certification of critical software.")
+ (license license:lgpl2.1+)))
+
(define-public elpa
(package
(name "elpa")
--
2.24.0